RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CCL4P13236 92 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 HNRNPA2B1P22626 353 aaKnown RBP14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 NOS2P35228 1153 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 BIRC3Q13489 604 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 ELAVL3Q14576 367 aaKnown RBP14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 ARID5BQ14865 1188 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 SURF1Q15526 300 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 ZNF667Q5HYK9 610 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 PIK3R6Q5UE93 754 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 RNF219Q5W0B1 726 aaPredicted RBP14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 ABI3BPQ7Z7G0 1075 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 CFAP52Q8N1V2 620 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 GALNT11Q8NCW6 608 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 NAT6Q93015 286 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 BMFQ96LC9 184 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 CDK5RAP1Q96SZ6 601 aaKnown RBP14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 DONSONQ9NYP3 566 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 KCND3Q9UK17 655 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 PNMA8BQ9ULN7 279 aaPredicted RBP14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 USP3Q9Y6I4 520 aa14.5□□□□□ -0.09
CSNK1D-213ENST00000580446 PCNX1Q96RV3 2341 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 ITIH6Q6UXX5 1313 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 A6NNZ2 444 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 TTLL8A6PVC2 850 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 H3BM21 787 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 SLC7A4O43246 635 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 IDEP14735 1019 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 GJB2P29033 226 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 OAS2P29728 719 aaKnown RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 RPIAP49247 311 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 CYP2J2P51589 502 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 ARSDP51689 593 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 ECT2LQ008S8 904 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 EIF2B5Q13144 721 aaKnown RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 PDE1CQ14123 709 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 ANKRD1Q15327 319 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 SNRNP35Q16560 246 aaKnown RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 BMT2Q1RMZ1 405 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 FAM133BQ5BKY9 247 aaKnown RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 PRRT3Q5FWE3 981 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 PIP5KL1Q5T9C9 394 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 SPOPLQ6IQ16 392 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 PARGQ86W56 976 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 CRYBG2Q8N1P7 616 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 IL22RA1Q8N6P7 574 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 CYFIP2Q96F07 1278 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 CUEDC1Q9NWM3 386 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 IPO11Q9UI26 975 aaKnown RBP14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 ITGB1BP2Q9UKP3 347 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 PCDHB13Q9Y5F0 798 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 CSNK1G3Q9Y6M4 447 aa14.49□□□□□ -0.09
CSNK1D-213ENST00000580446 SPTY2D1-AS1A0A0U1RR47 76 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 EFCAB7A8K855 629 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 CNTN5O94779 1100 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 PCDH8O95206 1070 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 STAU1O95793 577 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 SRPRAP08240 638 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 CCKBRP32239 447 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 CYP24A1Q07973 514 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 CDH18Q13634 790 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 FGL2Q14314 439 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 PRR30Q53SZ7 412 aaPredicted RBP14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 PHF19Q5T6S3 580 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 NADSYN1Q6IA69 706 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 HORMAD1Q86X24 394 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 UNC5BQ8IZJ1 945 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 WDR48Q8TAF3 677 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 FIBINQ8TAL6 211 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 PRR7Q8TB68 274 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 CPT1CQ8TCG5 803 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 DNAJC19Q96DA6 116 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 IFT43Q96FT9 208 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 SPAG5Q96R06 1193 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 LRRC61Q9BV99 259 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 UNKQ9C0B0 810 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 CLPBQ9H078 707 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 STOML2Q9UJZ1 356 aa14.48□□□□□ -0.09
CSNK1D-213ENST00000580446 STMND1H3BQB6 276 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 CLIC2O15247 247 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 YY2O15391 372 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 VNN1O95497 513 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 ATICP31939 592 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 ATP1A2P50993 1020 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 C16orf72Q14CZ0 275 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 PSMD6Q15008 389 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 PLEKHO2Q8TD55 490 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 OR8D1Q8WZ84 308 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 TMEM74Q96NL1 305 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 SEMA6CQ9H3T2 930 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 LRRN3Q9H3W5 708 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 PRDM8Q9NQV8 689 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 GPR27Q9NS67 375 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 DKK3Q9UBP4 350 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 APOBEC3BQ9UH17 382 aaKnown RBP14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 ERRFI1Q9UJM3 462 aaPredicted RBP14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 RNF215Q9Y6U7 377 aa14.47□□□□□ -0.09
CSNK1D-213ENST00000580446 ZNF891A8MT65 544 aaPredicted RBP14.46□□□□□ -0.09
CSNK1D-213ENST00000580446 DDAH2O95865 285 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms