RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FBXL22Q6P050 247 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ATP11CQ8NB49 1132 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TCEAL4Q96EI5 215 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RMDN2Q96LZ7 410 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MAN1C1Q9NR34 630 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RCOR3Q9P2K3 495 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HSFX1Q9UBD0 423 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 IRAK3Q9Y616 596 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SNX3O60493 162 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GPX6P59796 221 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CGB2Q6NT52 195 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RINLQ6ZS11 566 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 VSIG1Q86XK7 387 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 C12orf76Q8N812 135 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ANKS4BQ8N8V4 417 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ST13P5Q8NFI4 369 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 BHMTQ93088 406 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 OLFM3Q96PB7 478 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 KLF6Q99612 283 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NSRP1Q9H0G5 558 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SLCO1B3Q9NPD5 702 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SSX2IPQ9Y2D8 614 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 COL4A4P53420 1690 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 C5orf67F2Z3F1 127 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 DFFAO00273 331 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 AVILO75366 819 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SLC6A4P31645 630 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 WDR4P57081 412 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ARHGEF18Q6ZSZ5 1173 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TRPM8Q7Z2W7 1104 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 KLC2Q9H0B6 622 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ATXN3LQ9H3M9 355 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TRABDQ9H4I3 376 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 COMMD8Q9NX08 183 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CLUHO75153 1309 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NUP205Q92621 2012 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 A0A1W2PPM1 405 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ZNF487B1APH4 448 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 DNAJC8O75937 253 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 OAS1P00973 400 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 APRTP07741 180 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HDCP19113 662 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 KCNJ2P63252 427 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SLC45A4Q5BKX6 768 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MANEALQ5VSG8 457 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SNX30Q5VWJ9 437 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TMC8Q8IU68 726 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RIBC1Q8N443 379 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TRMT2BQ96GJ1 504 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SMC6Q96SB8 1091 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GRID1Q9ULK0 1009 aa12.97□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GOLGA8RI6L899 631 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MGRN1O60291 552 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TSPAN3O60637 253 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CLASP2O75122 1294 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 STC2O76061 302 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 METTL18O95568 372 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MBL2P11226 248 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CORO1AP31146 461 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ELK3P41970 407 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NR2C2P49116 596 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SGSHP51688 502 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MGAT5Q09328 741 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 DNAJC3Q13217 504 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TLDC1Q6P9B6 456 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ZNF683Q8IZ20 524 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PDZD8Q8NEN9 1154 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MAML1Q92585 1016 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RPRD1AQ96P16 312 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PLXNA3P51805 1871 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PRRC2BQ5JSZ5 2229 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 BCLAF3A2AJT9 711 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 FAM47DPA6NHR8 397 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HCAR3P49019 387 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GEMIN4P57678 1058 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RPS24P62847 133 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CREMQ03060 361 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HEATR6Q6AI08 1181 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TRABD2AQ86V40 505 aa12.96□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GPR65Q8IYL9 337 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms