RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 E2F5Q15329 346 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 TBCCQ15814 346 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 GALNTL6Q49A17 601 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 MIDNQ504T8 468 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 PARP10Q53GL7 1025 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 PLA1AQ53H76 456 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 CBWD5Q5RIA9 395 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 FCRL6Q6DN72 434 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 DENND1BQ6P3S1 775 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 DCLRE1AQ6PJP8 1040 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 SLC30A9Q6PML9 568 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 MCM10Q7L590 875 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 CHST3Q7LGC8 479 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 CCDC186Q7Z3E2 898 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 ADGRA1Q86SQ6 560 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 GAS2L3Q86XJ1 694 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 RAB11FIP4Q86YS3 637 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 ADGRF2Q8IZF7 708 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 ZNF619Q8N2I2 560 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 C10orf53Q8N6V4 93 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 FRMD1Q8N878 549 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 POGLUT1Q8NBL1 392 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 LSM14AQ8ND56 463 aaKnown RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 GABPB2Q8TAK5 448 aaPredicted RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 RMDN1Q96DB5 314 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 RBM17Q96I25 401 aaKnown RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 FAM227BQ96M60 508 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 NR1H4Q96RI1 486 aaPredicted RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 MED15Q96RN5 788 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 CPPED1Q9BRF8 314 aaPredicted RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 NUDT22Q9BRQ3 303 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 FSD1Q9BTV5 496 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 ACAT2Q9BWD1 397 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 INTS2Q9H0H0 1204 aaKnown RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 ZCWPW1Q9H0M4 648 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 SLC25A18Q9H1K4 315 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 SLC25A32Q9H2D1 315 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 KAT14Q9H8E8 782 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 GPR35Q9HC97 309 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 HPF1Q9NWY4 346 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 MARCH4Q9P2E8 410 aaPredicted RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 NCDNQ9UBB6 729 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 HDAC5Q9UQL6 1122 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 HPSEQ9Y251 543 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 RUVBL1Q9Y265 456 aaKnown RBP3.32□□□□□ -1.88
KPNB1-208ENST00000580019 IKBKGQ9Y6K9 419 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 KDM3AQ9Y4C1 1321 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 NEO1Q92859 1461 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 ZFYVE16Q7Z3T8 1539 aa3.32□□□□□ -1.88
KPNB1-208ENST00000580019 EFCAB5A4FU69 1503 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 LRRC7Q96NW7 1537 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 DENND4BO75064 1496 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TRAPPC8Q9Y2L5 1435 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SYNRGQ9UMZ2 1314 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CCDC187A0A096LP49 1063 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 NPIPB15A6NHN6 443 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 A8MV72 311 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PEX12O00623 359 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 BCAT2O15382 392 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 IPO8O15397 1037 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ADAM20O43506 726 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SLC22A3O75751 556 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PIAS2O75928 621 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 GGPS1O95749 300 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CHEK2O96017 543 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TUBB4AP04350 444 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 HLA-DOAP06340 250 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 WEE2P0C1S8 567 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SBK3P0C264 359 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TMIGD3P0DMS9 266 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 FPR1P21462 350 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 GP5P40197 560 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 VIPR2P41587 438 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CD86P42081 329 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PPP5CP53041 499 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CDH15P55291 814 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 RRP1P56182 461 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 HSD17B7P56937 341 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SF3A3Q12874 501 aaKnown RBP eCLIP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PDCLQ13371 301 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 KCNB1Q14721 858 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 KCNAB1Q14722 419 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SLMAPQ14BN4 828 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 MORF4L2Q15014 288 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 NTRK2Q16620 822 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ZNF750Q32MQ0 723 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 C2orf76Q3KRA6 126 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 MGAT5BQ3V5L5 792 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 RAB41Q5JT25 222 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ZNF484Q5JVG2 852 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ARMC4Q5T2S8 1044 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 OTUD7BQ6GQQ9 843 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 RAB12Q6IQ22 244 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TMEM154Q6P9G4 183 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SHQ1Q6PI26 577 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SLC9B2Q86UD5 537 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TRABD2AQ86V40 505 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 RHOT2Q8IXI1 618 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SAMD14Q8IZD0 417 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms