RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 CALN1Q9BXU9 219 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 SLC39A8Q9C0K1 460 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 PRDM16Q9HAZ2 1276 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 ATP13A1Q9HD20 1204 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 CACNA2D2Q9NY47 1150 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 SLCO3A1Q9UIG8 710 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 AMFRQ9UKV5 643 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 HS3ST2Q9Y278 367 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.27■■□□□ 1.32
NDEL1-207ENST00000580012 MFHAS1Q9Y4C4 1052 aa23.27■■□□□ 1.32
NDEL1-207ENST00000580012 CCDC66A2RUB6 948 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 ZRANB2O95218 330 aaKnown RBP eCLIP23.26■■□□□ 1.31
NDEL1-207ENST00000580012 CD160O95971 181 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 KRT1P04264 644 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 C7P10643 843 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 TDGF1P13385 188 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 TNNT1P13805 278 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 GLDCP23378 1020 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 HOXA6P31267 233 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 SLC20A2Q08357 652 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 SERINC3Q13530 473 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 PAFAH1B3Q15102 231 aaKnown RBP23.26■■□□□ 1.31
NDEL1-207ENST00000580012 SDE2Q6IQ49 451 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 TMCO3Q6UWJ1 677 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 MFSD7Q6UXD7 560 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 PEX26Q7Z412 305 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 EXD1Q8NHP7 514 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 RNF25Q96BH1 459 aaPredicted RBP23.26■■□□□ 1.31
NDEL1-207ENST00000580012 HMCESQ96FZ2 354 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 KCNH6Q9H252 994 aa23.26■■□□□ 1.31
NDEL1-207ENST00000580012 K7ESF4 209 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 ZSCAN12O43309 604 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 GALR2O43603 387 aaPredicted RBP23.25■■□□□ 1.31
NDEL1-207ENST00000580012 ATP9BO43861 1147 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 MT-CO1P00395 513 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 PRKCHP24723 683 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 CDKN2BP42772 138 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 ARF5P84085 180 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 ZFYVE27Q5T4F4 411 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 IL31Q6EBC2 164 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 HES6Q96HZ4 224 aa23.25■■□□□ 1.31
NDEL1-207ENST00000580012 RPL10LQ96L21 214 aaKnown RBP23.25■■□□□ 1.31
NDEL1-207ENST00000580012 DOCK4Q8N1I0 1966 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 MIF4GDA9UHW6 222 aaKnown RBP23.24■■□□□ 1.31
NDEL1-207ENST00000580012 DDX3YO15523 660 aaKnown RBP23.24■■□□□ 1.31
NDEL1-207ENST00000580012 FTCDO95954 541 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 WASP42768 502 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 NUMBP49757 651 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 STK19P49842 368 aaPredicted RBP23.24■■□□□ 1.31
NDEL1-207ENST00000580012 DGKEP52429 567 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 FNDC3BQ53EP0 1204 aaKnown RBP23.24■■□□□ 1.31
NDEL1-207ENST00000580012 NCBP2-AS2Q69YL0 99 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 SLC9A4Q6AI14 798 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 RETSATQ6NUM9 610 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 SERPINA13PQ6UXR4 307 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 ALYREFQ86V81 257 aaKnown RBP23.24■■□□□ 1.31
NDEL1-207ENST00000580012 TP53INP2Q8IXH6 220 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 CAMKK1Q8N5S9 505 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 FRS2Q8WU20 508 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 ALG3Q92685 438 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 CELF6Q96J87 481 aaKnown RBP23.24■■□□□ 1.31
NDEL1-207ENST00000580012 SUN2Q9UH99 717 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 FBXO4Q9UKT5 387 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 PYCARDQ9ULZ3 195 aa23.24■■□□□ 1.31
NDEL1-207ENST00000580012 CBX4O00257 560 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 LAMTOR5O43504 91 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 HOXB2P14652 356 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 PAPOLAP51003 745 aaKnown RBP23.23■■□□□ 1.31
NDEL1-207ENST00000580012 ST8SIA6P61647 398 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 CAMK2GQ13555 558 aaPredicted RBP23.23■■□□□ 1.31
NDEL1-207ENST00000580012 HNRNPA1L2Q32P51 320 aaKnown RBP23.23■■□□□ 1.31
NDEL1-207ENST00000580012 KIAA1211LQ6NV74 962 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 SPOCD1Q6ZMY3 1216 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 SH2D3CQ8N5H7 860 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 NELL1Q92832 810 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 SLC8A2Q9UPR5 921 aa23.23■■□□□ 1.31
NDEL1-207ENST00000580012 MIA3Q5JRA6 1907 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 ZSCAN5CA6NGD5 496 aaPredicted RBP23.22■■□□□ 1.31
NDEL1-207ENST00000580012 ARHGAP42A6NI28 874 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 TTC34A8MYJ7 566 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 SRCP12931 536 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 HLA-EP13747 358 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 SERPINB6P35237 376 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 CLCN6P51797 869 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 RWDD2BP57060 319 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 COPS2P61201 443 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 NHLH1Q02575 133 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 PPP2R5EQ16537 467 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 RBM41Q96IZ5 413 aaKnown RBP23.22■■□□□ 1.31
NDEL1-207ENST00000580012 PDFQ9HBH1 243 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 SLC25A13Q9UJS0 675 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 HPCAL4Q9UM19 191 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 EFR3BQ9Y2G0 817 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 RAD54BQ9Y620 910 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 PIEZO1Q92508 2521 aa23.22■■□□□ 1.31
NDEL1-207ENST00000580012 TARSL2A2RTX5 802 aaKnown RBP23.21■■□□□ 1.31
NDEL1-207ENST00000580012 K7ERQ8 282 aa23.21■■□□□ 1.31
NDEL1-207ENST00000580012 PRAMEF11O60813 436 aa23.21■■□□□ 1.31
NDEL1-207ENST00000580012 ZNF821O75541 412 aaPredicted RBP23.21■■□□□ 1.31
NDEL1-207ENST00000580012 NNMTP40261 264 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms