RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 FZD4Q9ULV1 537 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 SPTBN2O15020 2390 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 A0A1B0GTW7 788 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 C4orf47A7E2U8 309 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 DDX3XO00571 662 aaKnown RBP eCLIP15.21■□□□□ 0.031e-15■■■□□ 17.7
SS18-212ENST00000579061 MID1O15344 667 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 RTN2O75298 545 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 TPM3P06753 285 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 SYPP08247 313 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 PLEKP08567 350 aaPredicted RBP15.21■□□□□ 0.03
SS18-212ENST00000579061 SRCP12931 536 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 RHOQP17081 205 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 ENGP17813 658 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 SLC8A1P32418 973 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 ETFBP38117 255 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 MAPKAPK2P49137 400 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 CLCN6P51797 869 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 SLC20A2Q08357 652 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 ACCSLQ4AC99 568 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 SLFN11Q7Z7L1 901 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 CCDC185Q8N715 623 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 TMEM248Q9NWD8 314 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 VPS51Q9UID3 782 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 CAPN11Q9UMQ6 739 aa15.21■□□□□ 0.03
SS18-212ENST00000579061 A0A0D9SEW6 157 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 TMCO5BA8MYB1 307 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 ARHGAP33O14559 1287 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 MCF2LO15068 1137 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 SNAP91O60641 907 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 LRIG2O94898 1065 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 FTLP02792 175 aaPredicted RBP15.2■□□□□ 0.02
SS18-212ENST00000579061 VAV1P15498 845 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 GOT1P17174 413 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 MAOBP27338 520 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 L1CAMP32004 1257 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 ZBED6P86452 979 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 GNA12Q03113 381 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 MAMLD1Q13495 774 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 FAM46CQ5VWP2 391 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 RETSATQ6NUM9 610 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 NLRP14Q86W24 1093 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 GANCQ8TET4 914 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 FNIP1Q8TF40 1166 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 FAM131CQ96AQ9 280 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 TBC1D31Q96DN5 1066 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 TRIM11Q96F44 468 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 CCDC114Q96M63 670 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 OMDQ99983 421 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 ZDHHC5Q9C0B5 715 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 ISCUQ9H1K1 167 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 C6orf106Q9H6K1 298 aaPredicted RBP15.2■□□□□ 0.02
SS18-212ENST00000579061 OSGEPQ9NPF4 335 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 IFNKQ9P0W0 207 aa15.2■□□□□ 0.02
SS18-212ENST00000579061 TPX2Q9ULW0 747 aaKnown RBP15.2■□□□□ 0.02
SS18-212ENST00000579061 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
SS18-212ENST00000579061 PCNX2A6NKB5 2137 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 KNL1Q8NG31 2342 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 A0A1W2PP55 124 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 FAM72CH0Y354 149 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 BCAT2O15382 392 aaPredicted RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 ZMPSTE24O75844 475 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 IL1BP01584 269 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 MYBL1P10243 752 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 SKILP12757 684 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 PSMD8P48556 350 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 NUMBP49757 651 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 ATXN3P54252 364 aaPredicted RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 FAM72AQ5TYM5 149 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 HGSNATQ68CP4 663 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 FAM72DQ6L9T8 149 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 Q6ZVU0 165 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 TMC6Q7Z403 805 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 VPS36Q86VN1 386 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 FAM72BQ86X60 149 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 ATP11CQ8NB49 1132 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 OR7D4Q8NG98 312 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 OR2T34Q8NGX1 318 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 C1orf216Q8TAB5 229 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 ACE2Q9BYF1 805 aaPredicted RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 MAGEH1Q9H213 219 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 ATP13A1Q9HD20 1204 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 SERGEFQ9UGK8 458 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 PPM1HQ9ULR3 514 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 FZD10Q9ULW2 581 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 NEU3Q9UQ49 428 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
SS18-212ENST00000579061 SCINQ9Y6U3 715 aa15.19■□□□□ 0.02
SS18-212ENST00000579061 TMEM191CA6NGB0 347 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 LRRC72A6NJI9 287 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 UPK3BL1B0FP48 263 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 EIF3CLB5ME19 914 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 C10orf142B7Z368 130 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 UPK3BL2E5RIL1 263 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 C1QTNF3-AMACRE9PGA6 284 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms