RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CNDP2Q96KP4 475 aaKnown RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 CPXM1Q96SM3 734 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 BPIFA3Q9BQP9 254 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 NDST4Q9H3R1 872 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 FAM204AQ9H8W3 233 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 ERVMER34-1Q9H9K5 563 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 COX16Q9P0S2 106 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 APEX2Q9UBZ4 518 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 PCDHGC3Q9UN70 934 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 PCDHGA1Q9Y5H4 931 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 DOCK9Q9BZ29 2069 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 MYLKQ15746 1914 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 TLR4O00206 839 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 ENC1O14682 589 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 SLC7A4O43246 635 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 ATP9BO43861 1147 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 HSF2BPO75031 334 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 ATP1A3P13637 1013 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 VAV1P15498 845 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 NUDT1P36639 197 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 USP8P40818 1118 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 RXRGP48443 463 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 NXPH1P58417 271 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 DNAJC3Q13217 504 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 IQCB1Q15051 598 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 ARHGAP44Q17R89 818 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 FAM46CQ5VWP2 391 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 GJB7Q6PEY0 223 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 GBP6Q6ZN66 633 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 IQCHQ86VS3 1027 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 CIR1Q86X95 450 aaPredicted RBP12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 MFSD2AQ8NA29 543 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 OR8D1Q8WZ84 308 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 RPRD1AQ96P16 312 aaPredicted RBP12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 FEM1AQ9BSK4 669 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 HSD3B7Q9H2F3 369 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 ARHGAP20Q9P2F6 1191 aa12.92□□□□□ -0.34
SMARCD2-207ENST00000578234 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 MCF2LO15068 1137 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 ALOX15BO15296 676 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 PLRG1O43660 514 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 MAGEC1O60732 1142 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 TPM2P07951 284 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 ZNF18P17022 549 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 MAT2AP31153 395 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 HNF1BP35680 557 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 COPB1P53618 953 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 SNX16P57768 344 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 PPP2CBP62714 309 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 PPP2CAP67775 309 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 PTK2Q05397 1052 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 OVGP1Q12889 678 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 ZNF177Q13360 481 aaPredicted RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 AUHQ13825 339 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 EXOC3L4Q17RC7 722 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 POM121L1PQ3SYA9 428 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 C5orf22Q49AR2 442 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 C6orf118Q5T5N4 469 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 NAPEPLDQ6IQ20 393 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 LRRC69Q6ZNQ3 347 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 PRPF39Q86UA1 669 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 OXR1Q8N573 874 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 ANKRD20A12PQ8NF67 263 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 OR52K2Q8NGK3 314 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 TSC1Q92574 1164 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 CRELD1Q96HD1 420 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 TSPY26PQ9H489 355 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 SLC25A13Q9UJS0 675 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 SARDHQ9UL12 918 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 PPM1HQ9ULR3 514 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D30Q9Y2I9 924 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 OR51B4Q9Y5P0 310 aa12.91□□□□□ -0.34
SMARCD2-207ENST00000578234 ARID1BQ8NFD5 2236 aaPredicted RBP12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 A0A087WV48 116 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 RTN2O75298 545 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 CLDN11O75508 207 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 GRAP2O75791 330 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 PON1P27169 355 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 EPHA8P29322 1005 aaPredicted RBP12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 NOS2P35228 1153 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 METAP1P53582 386 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 CENPCQ03188 943 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 NME3Q13232 169 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 DLG2Q15700 870 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 SFMBT2Q5VUG0 894 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 OLFML1Q6UWY5 402 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 FAM183BPQ6ZVS7 135 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 TRIM69Q86WT6 500 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 SPATS2Q86XZ4 545 aaKnown RBP12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 LIMA1Q9UHB6 759 aaKnown RBP12.9□□□□□ -0.34
SMARCD2-207ENST00000578234 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms