RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 CLCN6P51797 869 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 CDH4P55283 916 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 CNTN1Q12860 1018 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 BNIP3Q12983 259 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 BROXQ5VW32 411 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 ISM2Q6H9L7 571 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 CXorf57Q6NSI4 855 aaKnown RBP14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 LRRC31Q6UY01 552 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 C11orf57Q6ZUT1 292 aaPredicted RBP14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 Q6ZVU0 165 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 ZSCAN30Q86W11 494 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 CIR1Q86X95 450 aaPredicted RBP14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 DCP2Q8IU60 420 aaKnown RBP14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 DEFB106AQ8N104 65 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 LSMEM2Q8N112 164 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 SH2D3CQ8N5H7 860 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 PPP1R13BQ96KQ4 1090 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 FCRL3Q96P31 734 aaPredicted RBP14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 SLC2A13Q96QE2 648 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 FEM1AQ9BSK4 669 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 USP29Q9HBJ7 922 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 KLHL11Q9NVR0 708 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 PPM1HQ9ULR3 514 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 STAP1Q9ULZ2 295 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 PLXNA2O75051 1894 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 TEX51A0A1B0GUA7 166 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 KPNA3O00505 521 aaPredicted RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 WNT9AO14904 365 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 ATXN7O15265 892 aaPredicted RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 DAB1O75553 588 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 CALCAP01258 141 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 RHOCP08134 193 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 THEGLP0DJG4 465 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 VAV1P15498 845 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 HNRNPA2B1P22626 353 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 KRT9P35527 623 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 UCNP55089 124 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 PTK2Q05397 1052 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 NME3Q13232 169 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 AUHQ13825 339 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 PROX2Q3B8N5 592 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 BRMS1LQ5PSV4 323 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 AGBL4Q5VU57 503 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 OR6B2Q6IFH4 312 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 GPR155Q7Z3F1 870 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 SPATS2Q86XZ4 545 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 ZDHHC17Q8IUH5 632 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 ATP11CQ8NB49 1132 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 OR4C6Q8NH72 309 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 IFT43Q96FT9 208 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 DEPDC7Q96QD5 511 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 DUSP23Q9BVJ7 150 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 SRRTQ9BXP5 876 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 NCKIPSDQ9NZQ3 722 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 ARHGAP20Q9P2F6 1191 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 VANGL2Q9ULK5 521 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 HS3ST2Q9Y278 367 aa14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 FASNP49327 2511 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-205ENST00000577686 FREM2Q5SZK8 3169 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 CABIN1Q9Y6J0 2220 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 H3BM21 787 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 SDC3O75056 442 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 NOS2P35228 1153 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 CENPCQ03188 943 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 EIF4EBP2Q13542 120 aaPredicted RBP14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 TBC1D25Q3MII6 688 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 GBP6Q6ZN66 633 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 SETD3Q86TU7 594 aaPredicted RBP14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 HORMAD1Q86X24 394 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 DCBLD1Q8N8Z6 715 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 MSANTD4Q8NCY6 345 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 C1orf131Q8NDD1 294 aaKnown RBP14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 TMIEQ8NEW7 156 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 BBC3Q96PG8 261 aaPredicted RBP14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 LGMNQ99538 433 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 CALN1Q9BXU9 219 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 PDCL3Q9H2J4 239 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 PRORYQ9H606 182 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 APEX2Q9UBZ4 518 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 PCDHGC3Q9UN70 934 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 TBC1D30Q9Y2I9 924 aa14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 URB1O60287 2271 aaKnown RBP14.57□□□□□ -0.08
SMARCD2-205ENST00000577686 A0A1W2PQU0 124 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 A6NNZ2 444 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 PPP1R3GB7ZBB8 358 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 M0QYT0 321 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 SLC31A1O15431 190 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 SIGLEC6O43699 453 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 BRINP1O60477 761 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 PAGE1O75459 146 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 PCDH8O95206 1070 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 MT-CO3P00414 261 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 F9P00740 461 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 GP1BAP07359 652 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 PRKCSHP14314 528 aaPredicted RBP14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 ITPKBP27987 946 aa14.56□□□□□ -0.08
SMARCD2-205ENST00000577686 CHRNA3P32297 505 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms