RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 MDM4O15151 490 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 IFNA2P01563 188 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 HLA-DQA2P01906 255 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 CYP2J2P51589 502 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 PRTGQ2VWP7 1150 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 C5orf22Q49AR2 442 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 ALG10Q5BKT4 473 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 ALG10BQ5I7T1 473 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 AAGABQ6PD74 315 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 C2CD5Q86YS7 1000 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 SLC25A41Q8N5S1 370 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 ZNF366Q8N895 744 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 KDM1BQ8NB78 822 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 INPP5DQ92835 1189 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 RBM17Q96I25 401 aaKnown RBP5.74□□□□□ -1.49
NUP88-213ENST00000576862 CAMK1GQ96NX5 476 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 FZD3Q9NPG1 666 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 PNRC2Q9NPJ4 139 aaKnown RBP5.74□□□□□ -1.49
NUP88-213ENST00000576862 RASSF1Q9NS23 344 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 ANAPC4Q9UJX5 808 aa5.74□□□□□ -1.49
NUP88-213ENST00000576862 RSF1Q96T23 1441 aaPredicted RBP5.74□□□□□ -1.49
NUP88-213ENST00000576862 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 B4DGG1 531 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 H3BNX3 289 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 ZC3H11AO75152 810 aaKnown RBP eCLIP5.73□□□□□ -1.49
NUP88-213ENST00000576862 METTL18O95568 372 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 NTN1O95631 604 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 POLD2P49005 469 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 EFR3AQ14156 821 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 CTXN3Q4LDR2 81 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 RUNDC3AQ59EK9 446 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 FBXO47Q5MNV8 452 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 CBWD5Q5RIA9 395 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 CMASQ8NFW8 434 aaPredicted RBP5.73□□□□□ -1.49
NUP88-213ENST00000576862 CEP70Q8NHQ1 597 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 MASTLQ96GX5 879 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 COG8Q96MW5 612 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 FAM234AQ9H0X4 552 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 ACTR5Q9H9F9 607 aaPredicted RBP5.73□□□□□ -1.49
NUP88-213ENST00000576862 RNF146Q9NTX7 359 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 ZDHHC7Q9NXF8 308 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 HDAC6Q9UBN7 1215 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 SQORQ9Y6N5 450 aa5.73□□□□□ -1.49
NUP88-213ENST00000576862 CECR2Q9BXF3 1484 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 CD8B2A6NJW9 211 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 HOXB2P14652 356 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 TNFSF8P32971 234 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 CCT4P50991 539 aaKnown RBP5.72□□□□□ -1.49
NUP88-213ENST00000576862 PPFIA1Q13136 1202 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 DHX8Q14562 1220 aaKnown RBP5.72□□□□□ -1.49
NUP88-213ENST00000576862 PTGR1Q14914 329 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 ANKRD45Q5TZF3 282 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 TRAPPC11Q7Z392 1133 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 IGFN1Q86VF2 1251 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 TMEM199Q8N511 208 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 SCAIQ8N9R8 606 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 PPP1R10Q96QC0 940 aaKnown RBP5.72□□□□□ -1.49
NUP88-213ENST00000576862 FRG2BQ96QU4 278 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 CADM1Q9BY67 442 aaKnown RBP5.72□□□□□ -1.49
NUP88-213ENST00000576862 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.72□□□□□ -1.49
NUP88-213ENST00000576862 TASP1Q9H6P5 420 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 CD207Q9UJ71 328 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 OSGIN2Q9Y236 505 aa5.72□□□□□ -1.49
NUP88-213ENST00000576862 SAC3D1A6NKF1 404 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 TPD52L2O43399 206 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 DHX16O60231 1041 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 CCNT1O60563 726 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 DDAH2O95865 285 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 SYF2O95926 243 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 CRYABP02511 175 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 CNPP09543 421 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 TBXAS1P24557 533 aaPredicted RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 PRKCHP24723 683 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 MTNR1AP48039 350 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 ARHGAP8P85298 464 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 BYSLQ13895 437 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 EPHA10Q5JZY3 1008 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 SH2D4BQ5SQS7 431 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 AADACL2Q6P093 401 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 TRIM74Q86UV6 250 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 TRIM73Q86UV7 250 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 PELI3Q8N2H9 469 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 HDAC7Q8WUI4 952 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 TBC1D14Q9P2M4 693 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 ICKQ9UPZ9 632 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 RRP7AQ9Y3A4 280 aaKnown RBP5.71□□□□□ -1.5
NUP88-213ENST00000576862 MST1RQ04912 1400 aa5.71□□□□□ -1.5
NUP88-213ENST00000576862 FAM90A10PA6NDY2 464 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 TMEM247A6NEH6 219 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 MYMKA6NI61 221 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 KLKB1P03952 638 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 GJC1P36383 396 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 PAPOLAP51003 745 aaKnown RBP5.7□□□□□ -1.5
NUP88-213ENST00000576862 PPATQ06203 517 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 AP5B1Q2VPB7 878 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 SYTL3Q4VX76 610 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 Q5PR19 223 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 DENND1BQ6P3S1 775 aa5.7□□□□□ -1.5
NUP88-213ENST00000576862 FAM217AQ8IXS0 508 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms