RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PRLRP16471 622 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 HNRNPA2B1P22626 353 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 NUMBP49757 651 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 STILQ15468 1287 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 RABGAP1LQ5R372 815 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 TTC39BQ5VTQ0 682 aaPredicted RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 ZCCHC8Q6NZY4 707 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 NEK5Q6P3R8 708 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 LCLAT1Q6UWP7 414 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 RBM44Q6ZP01 1051 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 PTAR1Q7Z6K3 402 aaPredicted RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 DCP2Q8IU60 420 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 ATP6V0D2Q8N8Y2 350 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 FAM174AQ8TBP5 190 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 IFT43Q96FT9 208 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 EEF2KMTQ96G04 330 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 HSFY1Q96LI6 401 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 TRIM4Q9C037 500 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 IL17BQ9UHF5 180 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 IPO11Q9UI26 975 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 CFAP45Q9UL16 551 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 A6NNZ2 444 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 K7ESM1 405 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 KPNA3O00505 521 aaPredicted RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 SCAMP1O15126 338 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 PCDH8O95206 1070 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 MYF5P13349 255 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 MLLT3P42568 568 aaPredicted RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 METAP1P53582 386 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 CDKN3Q16667 212 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 PMF1Q6P1K2 205 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 XKR5Q6UX68 686 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 EFL1Q7Z2Z2 1120 aaKnown RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 HORMAD1Q86X24 394 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 CCAR2Q8N163 923 aaKnown RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 TMEM145Q8NBT3 493 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 OR13H1Q8NG92 308 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 WDR36Q8NI36 951 aaKnown RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 CLEC4CQ8WTT0 213 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 GLMNQ92990 594 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 ATXN7L3BQ96GX2 97 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 BTN2A3PQ96KV6 586 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 SLC46A1Q96NT5 459 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 CCNL2Q96S94 520 aaPredicted RBP12.27□□□□□ -0.45
CTNS-208ENST00000574218 SYNDIG1Q9H7V2 258 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 FZD3Q9NPG1 666 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 ST7Q9NRC1 585 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 SARDHQ9UL12 918 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 PCDHB4Q9Y5E5 795 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 PCDHGA8Q9Y5G5 932 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.45
CTNS-208ENST00000574218 COL27A1Q8IZC6 1860 aaPredicted RBP12.26□□□□□ -0.45
CTNS-208ENST00000574218 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.26□□□□□ -0.45
CTNS-208ENST00000574218 TCAF2A6NFQ2 919 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 MCF2LO15068 1137 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 NEBLO76041 1014 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 RHOBTB3O94955 611 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
CTNS-208ENST00000574218 PAEPP09466 180 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 KRT10P13645 584 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 RPIAP49247 311 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 LRMPQ12912 555 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 ZNF177Q13360 481 aaPredicted RBP12.26□□□□□ -0.45
CTNS-208ENST00000574218 NR0B2Q15466 257 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 DLG2Q15700 870 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 CNGA2Q16280 664 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 EDRF1Q3B7T1 1238 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 ZC3H12AQ5D1E8 599 aaKnown RBP12.26□□□□□ -0.45
CTNS-208ENST00000574218 ATL3Q6DD88 541 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 TMEM270Q6UE05 265 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 ATG14Q6ZNE5 492 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 Q6ZVU0 165 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 USP53Q70EK8 1073 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 WDR48Q8TAF3 677 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 FRS2Q8WU20 508 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 SLC35F5Q8WV83 523 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 ARRDC3Q96B67 414 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 SLC39A13Q96H72 371 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 IL12RB2Q99665 862 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 NAALADL1Q9UQQ1 740 aa12.26□□□□□ -0.45
CTNS-208ENST00000574218 ATP9BO43861 1147 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 LZTS3O60299 673 aaPredicted RBP12.25□□□□□ -0.45
CTNS-208ENST00000574218 TCEA3O75764 348 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 TNFSF15O95150 251 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 GJB6O95452 261 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 NTRK1P04629 796 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 TGM2P21980 687 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
CTNS-208ENST00000574218 PLK1P53350 603 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 ZNF542PQ5EBM4 170 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 Q6ZSR6 202 aa12.25□□□□□ -0.45
CTNS-208ENST00000574218 CIR1Q86X95 450 aaPredicted RBP12.25□□□□□ -0.45
CTNS-208ENST00000574218 ZNF548Q8NEK5 533 aaPredicted RBP12.25□□□□□ -0.45
CTNS-208ENST00000574218 PPP1R16AQ96I34 528 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms