RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 DCAF4L2Q8NA75 395 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 HSPH1Q92598 858 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 HHIPQ96QV1 700 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 TMEM245Q9H330 911 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 ZDHHC4Q9NPG8 344 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 C2orf42Q9NWW7 574 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHD3-216ENST00000573936 RCOR3Q9P2K3 495 aaPredicted RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 ZNF212Q9UDV6 495 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 A0A0D9SEW6 157 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 A0A1W2PQF6 199 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 WASH3PC4AMC7 463 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 AXIN1O15169 862 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 PJA2O43164 708 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 ARHGAP6O43182 974 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 FOXD2O60548 495 aaPredicted RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 LRP3O75074 770 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 RETP07949 1114 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 PRKCHP24723 683 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 FNTBP49356 437 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 NDST2P52849 883 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 GEMIN4P57678 1058 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 SIM2Q14190 667 aaPredicted RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 PDK2Q15119 407 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 CA9Q16790 459 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 SMTNL2Q2TAL5 461 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 USP39Q53GS9 565 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 KCNT1Q5JUK3 1230 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 ZFYVE27Q5T4F4 411 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 DAB2IPQ5VWQ8 1189 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 RFX8Q6ZV50 586 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 POLNQ7Z5Q5 900 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 PGBD3Q8N328 593 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 LZTR1Q8N653 840 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 ARHGEF2Q92974 986 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 MRGPRX3Q96LB0 322 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 PSMB7Q99436 277 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 SPON2Q9BUD6 331 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 ATP13A1Q9HD20 1204 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
CHD3-216ENST00000573936 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHD3-216ENST00000573936 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 CWC15Q9P013 229 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
CHD3-216ENST00000573936 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 EDDM13A0A1B0GTR0 161 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 ZSCAN5CA6NGD5 496 aaPredicted RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 ARHGAP42A6NI28 874 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 SLC30A4O14863 429 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 SPOPO43791 374 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 ATP9BO43861 1147 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 RNASEH1O60930 286 aaKnown RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 TCF4P15884 667 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 GOT1P17174 413 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 ERCC2P18074 760 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 CTSOP43234 321 aaPredicted RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 CLCN6P51797 869 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 CDH6P55285 790 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 DMWDQ09019 674 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 KIF5AQ12840 1032 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 CAMK2GQ13555 558 aaPredicted RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 HNRNPA1L2Q32P51 320 aaKnown RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 PARP15Q460N3 678 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 LRRC38Q5VT99 294 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 C11orf74Q86VG3 221 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 RHOT1Q8IXI2 618 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 UMODL1-AS1Q8N2C9 162 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 ACRBPQ8NEB7 543 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 OR7D4Q8NG98 312 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 OR2T3Q8NH03 318 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 FAM71BQ8TC56 605 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 HMGB4Q8WW32 186 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 MYO19Q96H55 970 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 RPL10LQ96L21 214 aaKnown RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 ACE2Q9BYF1 805 aaPredicted RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 TSGA10Q9BZW7 698 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 SEMA4GQ9NTN9 838 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
CHD3-216ENST00000573936 DDX56Q9NY93 547 aaKnown RBP11.28□□□□□ -0.6
CHD3-216ENST00000573936 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms