RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 UPK3BL1B0FP48 263 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 UPK3BL2E5RIL1 263 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 C1QTNF3-AMACRE9PGA6 284 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 CBX4O00257 560 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 ATP9BO43861 1147 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 CALB1P05937 261 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 IGHV4-34P06331 123 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 SRCP12931 536 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 FERP16591 822 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 METAP1P53582 386 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 ADPRHP54922 357 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 BNC1Q01954 994 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 SLC14A1Q13336 389 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 KIF19Q2TAC6 998 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM46CQ5VWP2 391 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 RWDD4Q6NW29 188 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 LINGO4Q6UY18 593 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 BNIPLQ7Z465 357 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 NAXDQ8IW45 347 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 DRC7Q8IY82 874 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 OR7D4Q8NG98 312 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 SETD7Q8WTS6 366 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM172AQ8WUF8 416 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 PSMB7Q99436 277 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TM7SF3Q9NS93 570 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 IGLV3-10A0A075B6K4 115 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 ANKRD62A6NC57 917 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 K7ERQ8 282 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 KCNK3O14649 394 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 RTN2O75298 545 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 GJB3O75712 270 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 ENDOD1O94919 500 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 MT-CO1P00395 513 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 SERPINC1P01008 464 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 SPINK2P20155 84 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 GPD1P21695 349 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 GLDCP23378 1020 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 RRM1P23921 792 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 RFC1P35251 1148 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 ADRA1BP35368 520 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 PTPN9P43378 593 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 GRIA4P48058 902 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 C21orf59P57076 290 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM193AP78312 1265 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 PHF13Q86YI8 300 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 DCAF4L2Q8NA75 395 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 PIP4K2CQ8TBX8 421 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 CCDC114Q96M63 670 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 SLC6A18Q96N87 628 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 ACE2Q9BYF1 805 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 ATP13A1Q9HD20 1204 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 OSGEPQ9NPF4 335 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 AASDHPPTQ9NRN7 309 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 OR12D3Q9UGF7 316 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 SARDHQ9UL12 918 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 HS3ST2Q9Y278 367 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 ANKRD6Q9Y2G4 727 aa13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 FNDC3AQ9Y2H6 1198 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 NYNRINQ9P2P1 1898 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-213ENST00000573519 A0A1B0GTH6 734 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 A0A1W2PPC4 97 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 ILVBLA1L0T0 632 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 MCF2LO15068 1137 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 TOP3BO95985 862 aaKnown RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 TNFAIP3P21580 790 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 MAT2AP31153 395 aaKnown RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 DRD3P35462 400 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 RACK1P63244 317 aaKnown RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 SHC2P98077 582 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 CNTN1Q12860 1018 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 TRIP6Q15654 476 aaKnown RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 WDR59Q6PJI9 974 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 MON1BQ7L1V2 547 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 STRADAQ7RTN6 431 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 CCDC185Q8N715 623 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 C3orf20Q8ND61 904 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 BAP1Q92560 729 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 MCEEQ96PE7 176 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 TNKS2Q9H2K2 1166 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 EBF2Q9HAK2 575 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms