RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SCAPQ12770 1279 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ARL13BQ3SXY8 428 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 SLC9B1Q4ZJI4 515 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 IRGCQ6NXR0 463 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 RAPH1Q70E73 1250 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 NMRAL1Q9HBL8 299 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 PCDHB12Q9Y5F1 795 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 NCAM2O15394 837 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 PHGDHO43175 533 aaKnown RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 FBXO21O94952 628 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 GLRBP48167 497 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CCNHP51946 323 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ITGA7Q13683 1181 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ZRSR2Q15696 482 aaKnown RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CCL14Q16627 93 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 FAM110CQ1W6H9 321 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 TCHHL1Q5QJ38 904 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 RWDD4Q6NW29 188 aaKnown RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 DEFB107AQ8IZN7 70 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 OR6Y1Q8NGX8 325 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 SPATA22Q8NHS9 363 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 SLC26A7Q8TE54 656 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 RNF34Q969K3 372 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ISL2Q96A47 359 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 HDAC11Q96DB2 347 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 APBA2Q99767 749 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CNGB3Q9NQW8 809 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 NEMP1O14524 444 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ALOX15P16050 662 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 AVPR1AP37288 418 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 GALNT2Q10471 571 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CUL3Q13618 768 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ARHGAP36Q6ZRI8 547 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ANKRD23Q86SG2 305 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CLEC14AQ86T13 490 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 HPS6Q86YV9 775 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 OR52B2Q96RD2 323 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 UNKQ9C0B0 810 aaKnown RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 SIK2Q9H0K1 926 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CDH19Q9H159 772 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 WDR55Q9H6Y2 383 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-212ENST00000573126 MIOSQ9NXC5 875 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CDH22Q9UJ99 828 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CDY2AQ9Y6F7 541 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 CDY1Q9Y6F8 540 aa11.44□□□□□ -0.58
RPAIN-212ENST00000573126 C17orf102A2RUQ5 167 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 TRIM13O60858 407 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 MT-CYBP00156 380 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 CTSHP09668 335 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 UBTFL6P0CB48 400 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 CDK7P50613 346 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 AIF1P55008 147 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 DSG1Q02413 1049 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 GRM3Q14832 879 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 BHLHA9Q7RTU4 235 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 CNTD1Q8N815 330 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 TDRD5Q8NAT2 981 aaKnown RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 CMTM5Q96DZ9 223 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 TEKT5Q96M29 485 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 PARK7Q99497 189 aaKnown RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 EPAS1Q99814 870 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 GATA5Q9BWX5 397 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 IL22Q9GZX6 179 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 TASP1Q9H6P5 420 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 PACSIN3Q9UKS6 424 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 G3BP2Q9UN86 482 aaKnown RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ENO4A6NNW6 628 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 HAS3O00219 553 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 DFFAO00273 331 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ZNF865P0CJ78 1059 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ITGAXP20702 1163 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 MPSTP25325 297 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 SERPINB6P35237 376 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ZNF460Q14592 562 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 RAB41Q5JT25 222 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ITPRIPL1Q6GPH6 555 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 EPGNQ6UW88 154 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 TAC4Q86UU9 113 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ZNF419Q96HQ0 510 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 DDX50Q9BQ39 737 aaKnown RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 ACE2Q9BYF1 805 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-212ENST00000573126 FAM96AQ9H5X1 160 aa11.43□□□□□ -0.58
RPAIN-212ENST00000573126 DOCK3Q8IZD9 2030 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 ERI2A8K979 691 aaKnown RBP11.42□□□□□ -0.58
RPAIN-212ENST00000573126 C9IYK1 514 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 HHLA1C9JL84 531 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 TIMM44O43615 452 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 MPOP05164 745 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 THP07101 528 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 MYL4P12829 197 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 BDNFP23560 247 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 SERPINB5P36952 375 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 LHX1P48742 406 aa11.42□□□□□ -0.58
RPAIN-212ENST00000573126 HCAR3P49019 387 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms