RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KCNMB2Q9Y691 235 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 SPAG17Q6Q759 2223 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 THADAQ6YHU6 1953 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 SYNJ2BP-COX16A0A087WUM0 186 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 LRRC10BA6NIK2 292 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 PATE3B3GLJ2 98 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 H0Y626 953 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 NDUFS2O75306 463 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 TNFRSF21O75509 655 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 DLDP09622 509 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 ACADMP11310 421 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 EPXP11678 715 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 HLA-EP13747 358 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 TACR2P21452 398 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 ITPKAP23677 461 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 PRKCHP24723 683 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 CCR1P32246 355 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 CDH5P33151 784 aaPredicted RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 DPP6P42658 865 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 GATA4P43694 442 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 GABRB2P47870 512 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 KLK7P49862 253 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 COPB1P53618 953 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 COPAP53621 1224 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 RNASE9P60153 205 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 POLR2FP61218 127 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 ST8SIA6P61647 398 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 IRX4P78413 519 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 MYL5Q02045 173 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 ZNF33AQ06730 810 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 LMAN2Q12907 356 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 NME3Q13232 169 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 MTA1Q13330 715 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 STX1AQ16623 288 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 PTPN20Q4JDL3 420 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 FNDC3BQ53EP0 1204 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 CCDC183Q5T5S1 534 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 SAMD5Q5TGI4 173 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 STPG1Q5TH74 334 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 TAF3Q5VWG9 929 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 LYSMD4Q5XG99 296 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 TCEAL6Q6IPX3 200 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 OLFML1Q6UWY5 402 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 SLC26A9Q7LBE3 791 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 CHSY1Q86X52 802 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 LGI2Q8N0V4 545 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 ZNF397Q8NF99 534 aaPredicted RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 DDX1Q92499 740 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 TCEAL3Q969E4 200 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 TTC17Q96AE7 1141 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 SIPA1Q96FS4 1042 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 ZNF419Q96HQ0 510 aaPredicted RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 LMLNQ96KR4 655 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 TMEM245Q9H330 911 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 WDCPQ9H6R7 721 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 FAM204AQ9H8W3 233 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 BRD7Q9NPI1 651 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 FAM207AQ9NSI2 230 aaPredicted RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 DDIT4Q9NX09 232 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 COX16Q9P0S2 106 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 LIMA1Q9UHB6 759 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 XPO7Q9UIA9 1087 aaKnown RBP7.68□□□□□ -1.18
NUP88-205ENST00000572809 PILRBQ9UKJ0 227 aa7.68□□□□□ -1.18
NUP88-205ENST00000572809 MED19A0JLT2 244 aaPredicted RBP7.67□□□□□ -1.18
NUP88-205ENST00000572809 C4orf47A7E2U8 309 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 F5H5T6 163 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 F8VZ95 297 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 M0QYT0 321 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 TM4SF5O14894 197 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 GIPC1O14908 333 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 DAB1O75553 588 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 GFPT2O94808 682 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 LUC7L3O95232 432 aaKnown RBP7.67□□□□□ -1.18
NUP88-205ENST00000572809 MOCS3O95396 460 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 LSM8O95777 96 aaKnown RBP7.67□□□□□ -1.18
NUP88-205ENST00000572809 F9P00740 461 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 ASLP04424 464 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 MMEP08473 750 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 CD6P30203 668 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 OXTRP30559 389 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 SOX5P35711 763 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 STAT1P42224 750 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 MATKP42679 507 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 TPMTP51580 245 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 UBXN1Q04323 297 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 TYRO3Q06418 890 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 CAMK2GQ13555 558 aaPredicted RBP7.67□□□□□ -1.18
NUP88-205ENST00000572809 CDH18Q13634 790 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 SYCP1Q15431 976 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 DUOXA1Q1HG43 343 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 TRIM61Q5EBN2 209 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 FSCBQ5H9T9 825 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 SYCP2LQ5T4T6 812 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 TTC39BQ5VTQ0 682 aaPredicted RBP7.67□□□□□ -1.18
NUP88-205ENST00000572809 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 MMS22LQ6ZRQ5 1243 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 NOP9Q86U38 636 aaKnown RBP7.67□□□□□ -1.18
NUP88-205ENST00000572809 ZNF677Q86XU0 584 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 XYLT1Q86Y38 959 aa7.67□□□□□ -1.18
NUP88-205ENST00000572809 SLC41A1Q8IVJ1 513 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms