RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CCNT2O60583 730 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 OPHN1O60890 802 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 FLOT1O75955 427 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF205O95201 554 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 KCNK5O95279 499 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PDGFBP01127 241 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PENKP01210 267 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 GNAI2P04899 355 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 THBS1P07996 1170 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TPH1P17752 444 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 AHCYP23526 432 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ALDH4A1P30038 563 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PRKAR1BP31321 381 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CCR1P32246 355 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CHRNA3P32297 505 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TTKP33981 857 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 LONP1P36776 959 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PEX5P50542 639 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 IRAK1P51617 712 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CCR3P51677 355 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 AP3M2P53677 418 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 EPHB3P54753 998 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PRRX1P54821 245 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 NPEPPSP55786 919 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 RAC3P60763 192 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 UFM1P61960 85 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PMP22Q01453 160 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 SCGB2A2Q13296 93 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 BOP1Q14137 746 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ARHGEF7Q14155 803 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ZRSR1Q15695 479 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PFKFB3Q16875 520 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 RTP2Q5QGT7 225 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 KANK2Q63ZY3 851 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ARHGAP17Q68EM7 881 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CLEC2AQ6UVW9 174 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 OLFML1Q6UWY5 402 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 KCTD9Q7L273 389 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 SYT9Q86SS6 491 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 KBTBD6Q86V97 674 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PSTKQ8IV42 348 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ARHGAP12Q8IWW6 846 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 DNAJC10Q8IXB1 793 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 SCYL3Q8IZE3 742 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 RASGEF1CQ8N431 466 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TRIML2Q8N7C3 387 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 MB21D1Q8N884 522 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 KDM1BQ8NB78 822 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 NHLRC2Q8NBF2 726 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CAMKVQ8NCB2 501 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TMEM116Q8NCL8 245 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 EZH1Q92800 747 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TMEM186Q96B77 213 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TOE1Q96GM8 510 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PRR11Q96HE9 360 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 COX4I2Q96KJ9 171 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 C5orf34Q96MH7 638 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PKP2Q99959 881 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 SH3GL1Q99961 368 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CACNG6Q9BXT2 260 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 HDAC8Q9BY41 377 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 LSG1Q9H089 658 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 THAP2Q9H0W7 228 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 KCNH6Q9H252 994 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 OSGEPL1Q9H4B0 414 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 C8orf33Q9H7E9 229 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 TMEM206Q9H813 350 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 GORASP2Q9H8Y8 452 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PLEKHA2Q9HB19 425 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 RAB20Q9NX57 234 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PIM2Q9P1W9 311 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 DKK4Q9UBT3 224 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 STX8Q9UNK0 236 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 RWDD3Q9Y3V2 267 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ENTPD2Q9Y5L3 495 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 DDX49Q9Y6V7 483 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 MYBBP1AQ9BQG0 1328 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 A0A1W2PQM1 296 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PRAMEF22A3QJZ6 481 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SMIM30A4D0T7 59 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 AQP7P3A6NL99 342 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ANXA2P2A6NMY6 339 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 VGLL3A8MV65 326 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 BTBD18B2RXH4 712 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 H7C1W4 665 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 GPR25O00155 361 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PSMD9O00233 223 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PPEF2O14830 753 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ATP2A1O14983 1001 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 IDH1O75874 414 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 RASAL1O95294 804 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SMC2O95347 1197 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 MT-ATP6P00846 226 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TGFAP01135 160 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 IL1AP01583 271 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PROCP04070 461 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 KRT8P05787 483 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ZFYP08048 801 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms