RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 A0A1B0GTQ1 180 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 MCF2LO15068 1137 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 FLRT2O43155 660 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 SMAD6O43541 496 aaKnown RBP18.59■□□□□ 0.57
CHD3-214ENST00000572579 ZNF821O75541 412 aaPredicted RBP18.59■□□□□ 0.57
CHD3-214ENST00000572579 SRCP12931 536 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 DEUP1Q05D60 604 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 CNTN1Q12860 1018 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 KRT31Q15323 416 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 ACCSLQ4AC99 568 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 CT47A1Q5JQC4 288 aaPredicted RBP18.59■□□□□ 0.57
CHD3-214ENST00000572579 BRMS1LQ5PSV4 323 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 FAM102AQ5T9C2 384 aaPredicted RBP18.59■□□□□ 0.57
CHD3-214ENST00000572579 AGBL4Q5VU57 503 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 NAA35Q5VZE5 725 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
CHD3-214ENST00000572579 PHLDB2Q86SQ0 1253 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 GATAD2AQ86YP4 633 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 EMC1Q8N766 993 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 ZCCHC14Q8WYQ9 949 aaKnown RBP18.59■□□□□ 0.57
CHD3-214ENST00000572579 C1orf74Q96LT6 269 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 CFAP57Q96MR6 1250 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 PCDHB18PQ96TA0 734 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 VPS16Q9H269 839 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 CAAP1Q9H8G2 361 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 RRN3Q9NYV6 651 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 VPS51Q9UID3 782 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 VPS28Q9UK41 221 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 HS3ST2Q9Y278 367 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 ZFYVE26Q68DK2 2539 aa18.59■□□□□ 0.57
CHD3-214ENST00000572579 DSPP15924 2871 aaKnown RBP18.58■□□□□ 0.57
CHD3-214ENST00000572579 TMEM8BA6NDV4 472 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 GOLGA8SH3BPF8 625 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 PES1O00541 588 aaKnown RBP18.58■□□□□ 0.56
CHD3-214ENST00000572579 GFPT2O94808 682 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 GJB6O95452 261 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 EEF1GP26641 437 aaKnown RBP18.58■□□□□ 0.56
CHD3-214ENST00000572579 NNMTP40261 264 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 OXCT1P55809 520 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 JAM2P57087 298 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 SNX16P57768 344 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 FMO1Q01740 532 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 LINGO4Q6UY18 593 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 SPATS2Q86XZ4 545 aaKnown RBP18.58■□□□□ 0.56
CHD3-214ENST00000572579 OR2A12Q8NGT7 310 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 PDCL3Q9H2J4 239 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 FANCLQ9NW38 375 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 DACH1Q9UI36 760 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 SIK3Q9Y2K2 1263 aa18.58■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3DA0A087WVF3 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3IA0A087WXS9 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3EA0A087X179 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3KA0A087X1G2 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3FA6NER0 549 aaPredicted RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3LB9A6J9 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 CBX4O00257 560 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 PLRG1O43660 514 aaKnown RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 ZMPSTE24O75844 475 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 ENDOD1O94919 500 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 LSM8O95777 96 aaKnown RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 CYP1A1P04798 512 aaPredicted RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3HP0C7X1 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 ZNF18P17022 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 RRM1P23921 792 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 CD38P28907 300 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 MAT2AP31153 395 aaKnown RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 CCT8P50990 548 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 SCAPQ12770 1279 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 PTP4A2Q12974 167 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3GQ6DHY5 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3CQ6IPX1 549 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TFAP2DQ7Z6R9 452 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 TBC1D3Q8IZP1 549 aaPredicted RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 CHST14Q8NCH0 376 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 OR7D4Q8NG98 312 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 SLC30A5Q8TAD4 765 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 PIP4K2CQ8TBX8 421 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 OR8D1Q8WZ84 308 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 VOPP1Q96AW1 172 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 ARRDC3Q96B67 414 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 SERAC1Q96JX3 654 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 ELF4Q99607 663 aaPredicted RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 ACE2Q9BYF1 805 aaPredicted RBP18.57■□□□□ 0.56
CHD3-214ENST00000572579 MUC3BQ9H195 1237 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 STAP1Q9ULZ2 295 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 CA5BQ9Y2D0 317 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 ACTL7AQ9Y615 435 aa18.57■□□□□ 0.56
CHD3-214ENST00000572579 GOLGA8CPA6NN73 597 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 E9PAM4 449 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 CD160O95971 181 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 F9P00740 461 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 RHOCP08134 193 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 MMP8P22894 467 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 RDXP35241 583 aaKnown RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 C21orf59P57076 290 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 POLR2FP61218 127 aaKnown RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 SFSWAPQ12872 951 aaKnown RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 MTA1Q13330 715 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 SUZ12Q15022 739 aaKnown RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 CCDC14Q49A88 953 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms