RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GMPRP36959 345 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 RANBP1P43487 201 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 GRIA4P48058 902 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 PKNOX1P55347 436 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 IRF9Q00978 393 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 LAMC2Q13753 1193 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 PAFAH1B3Q15102 231 aaKnown RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 TMEM135Q86UB9 458 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 ZNF560Q96MR9 790 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 AGAP2Q99490 1192 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 MRGBPQ9NV56 204 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 MAGED2Q9UNF1 606 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 FBXO21O94952 628 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 OR6B1O95007 311 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 STAMBPO95630 424 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 LGALS2P05162 132 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 ATP6V1B1P15313 513 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 XRCC1P18887 633 aaPredicted RBP10.96□□□□□ -0.66
CCDC40-207ENST00000572253 YY1P25490 414 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 NOS2P35228 1153 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 ABCG1P45844 678 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 NME3Q13232 169 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 PPP2R5DQ14738 602 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 DLG2Q15700 870 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 ATG14Q6ZNE5 492 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 CLEC14AQ86T13 490 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 SIX6OS1Q8N1H7 587 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 GALNT4Q8N4A0 578 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 CNTD1Q8N815 330 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 LENG1Q96BZ8 264 aaPredicted RBP10.96□□□□□ -0.66
CCDC40-207ENST00000572253 UBE2OQ9C0C9 1292 aaKnown RBP10.96□□□□□ -0.66
CCDC40-207ENST00000572253 BRD8Q9H0E9 1235 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 DMTF1Q9Y222 760 aa10.96□□□□□ -0.66
CCDC40-207ENST00000572253 PPEF2O14830 753 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 XPOTO43592 962 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 LTFP02788 710 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CHRNGP07510 517 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 SMIM18P0DKX4 95 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TFEBP19484 476 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 KPNA2P52292 529 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 GTF2A2P52657 109 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TPI1P60174 286 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 UGP2Q16851 508 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CRYBG2Q8N1P7 616 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CPSF7Q8N684 471 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 SLC2A14Q8TDB8 520 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 USP13Q92995 863 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 LPIN3Q9BQK8 851 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 IL22Q9GZX6 179 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ZNF696Q9H7X3 374 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CASS4Q9NQ75 786 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 SNTG2Q9NY99 539 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 APPL1Q9UKG1 709 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TRHDEQ9UKU6 1024 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 UBQLN1Q9UMX0 589 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 EVPLQ92817 2033 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ASB14A6NK59 587 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TRPC5OSA6NMA1 111 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 SOCS7O14512 581 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TRPA1O75762 1119 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CD4P01730 458 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ASLP04424 464 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ZNF423Q2M1K9 1284 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 PIGGQ5H8A4 983 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ARL13AQ5H913 290 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 IYDQ6PHW0 289 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ARMCX2Q7L311 632 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TMA16Q96EY4 203 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ADA2Q9NZK5 511 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TUBGCP4Q9UGJ1 667 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 XPO1O14980 1071 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 TADA2AO75478 443 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CAPN15O75808 1086 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 PTPN3P26045 913 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 NAGLUP54802 743 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 NR1H2P55055 460 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 ADIGQ0VDE8 80 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 SLC12A1Q13621 1099 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 VGLL4Q14135 290 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 MAPRE2Q15555 327 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 FBXO47Q5MNV8 452 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 NAPEPLDQ6IQ20 393 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CATSPER4Q7RTX7 472 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 CCNYL1Q8N7R7 359 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 APPL2Q8NEU8 664 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 EME1Q96AY2 570 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 PRPF18Q99633 342 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 MRPL1Q9BYD6 325 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 RUVBL2Q9Y230 463 aaKnown RBP10.95□□□□□ -0.66
CCDC40-207ENST00000572253 GINS2Q9Y248 185 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 COL1A2P08123 1366 aa10.95□□□□□ -0.66
CCDC40-207ENST00000572253 PSMD3O43242 534 aa10.94□□□□□ -0.66
CCDC40-207ENST00000572253 DNAJB2P25686 324 aa10.94□□□□□ -0.66
CCDC40-207ENST00000572253 PTK2BQ14289 1009 aa10.94□□□□□ -0.66
CCDC40-207ENST00000572253 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms