RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ALPK3Q96L96 1907 aa19.83■□□□□ 0.77
RPAIN-210ENST00000571613 C2orf78A6NCI8 922 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 C2orf71A6NGG8 1288 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 PRKCHP24723 683 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 MARC1Q5VT66 337 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 ARMC3Q5W041 872 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 PDE12Q6L8Q7 609 aaKnown RBP19.83■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF449Q6P9G9 518 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 ARHGAP36Q6ZRI8 547 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 CNTD1Q8N815 330 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 SPPL3Q8TCT6 385 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 POF1BQ8WVV4 589 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 CENPTQ96BT3 561 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF599Q96NL3 588 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF334Q9HCZ1 680 aaPredicted RBP19.83■□□□□ 0.76
RPAIN-210ENST00000571613 CASS4Q9NQ75 786 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 SAMD15Q9P1V8 674 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF510Q9Y2H8 683 aa19.83■□□□□ 0.76
RPAIN-210ENST00000571613 DOCK4Q8N1I0 1966 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 GOLGA6L7A0A1B0GV03 622 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 LINC01553A4QN01 128 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 SYN1P17600 705 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 PGAM1P18669 254 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 HDCP19113 662 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 GABRR2P28476 465 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 GCAP28676 217 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 ETFBP38117 255 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 ERVFC1P60507 584 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 GNGT1P63211 74 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 MTM1Q13496 603 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 TMED2Q15363 201 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 PPM1LQ5SGD2 360 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 LGSNQ5TDP6 509 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 STEAP4Q687X5 459 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF354CQ86Y25 554 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 DNAAF3Q8N9W5 541 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 PAFAH2Q99487 392 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 TRPC7Q9HCX4 862 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 ALG13Q9NP73 1137 aaKnown RBP19.82■□□□□ 0.76
RPAIN-210ENST00000571613 TBK1Q9UHD2 729 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 DPP7Q9UHL4 492 aa19.82■□□□□ 0.76
RPAIN-210ENST00000571613 LSM7Q9UK45 103 aaKnown RBP19.82■□□□□ 0.76
RPAIN-210ENST00000571613 AGO1Q9UL18 857 aaKnown RBP19.82■□□□□ 0.76
RPAIN-210ENST00000571613 IQANK1A0A1B0GTG1 560 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 A0A1B0GVM2 712 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 TYW5A2RUC4 315 aaKnown RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 LCHNA4D1U4 455 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 TCAF2A6NFQ2 919 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 INHBAP08476 426 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SPATA31D3P0C874 917 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 GRIA1P42261 906 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SESN2P58004 480 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 CDH17Q12864 832 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SERINC3Q13530 473 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 CASC4Q6P4E1 433 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 UNC5AQ6ZN44 842 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SPATA31D4Q6ZUB0 917 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SETD3Q86TU7 594 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 LRRC6Q86X45 466 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 AGGF1Q8N302 714 aaeCLIP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 BBS5Q8N3I7 341 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 TEX26Q8N6G2 289 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 USP33Q8TEY7 942 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 TTC17Q96AE7 1141 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SELENOSQ9BQE4 189 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 GORASP1Q9BQQ3 440 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SLC25A51Q9H1U9 297 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 ASAH2Q9NR71 780 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 GKN1Q9NS71 199 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 CTNNAL1Q9UBT7 734 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 MYO18AQ92614 2054 aaKnown RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 F5H423 210 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 KLKB1P03952 638 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 POLBP06746 335 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 KRT15P19012 456 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 MGAT1P26572 445 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SLC6A4P31645 630 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 IRAK1P51617 712 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SMAD3P84022 425 aaKnown RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 MPP3Q13368 585 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 NAB1Q13506 487 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 FAM182AQ5T1J6 154 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 PLPP4Q5VZY2 271 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 LEKR1Q6ZMV7 388 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 CCDC117Q8IWD4 279 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 MICAL1Q8TDZ2 1067 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 SLC44A1Q8WWI5 657 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 CDKL2Q92772 493 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 MLPHQ9BV36 600 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 IL22Q9GZX6 179 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 VPS45Q9NRW7 570 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF180Q9UJW8 692 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 TTLL3Q9Y4R7 772 aa19.81■□□□□ 0.76
RPAIN-210ENST00000571613 ZFP37Q9Y6Q3 630 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-210ENST00000571613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.8■□□□□ 0.76
RPAIN-210ENST00000571613 TRAV19A0A0A6YYK7 116 aa19.8■□□□□ 0.76
RPAIN-210ENST00000571613 ILVBLA1L0T0 632 aa19.8■□□□□ 0.76
RPAIN-210ENST00000571613 SOBPA7XYQ1 873 aa19.8■□□□□ 0.76
RPAIN-210ENST00000571613 DDX6P26196 483 aaKnown RBP eCLIP19.8■□□□□ 0.76
RPAIN-210ENST00000571613 HOXA9P31269 272 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms