RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ACVRL1P37023 503 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 EIF4A3P38919 411 aaKnown RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 MAPKAPK2P49137 400 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 METAP1P53582 386 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 GNA12Q03113 381 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 LMNB2Q03252 620 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ZNF33AQ06730 810 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 CA9Q16790 459 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ASTE1Q2TB18 679 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 DAB2IPQ5VWQ8 1189 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 PEAR1Q5VY43 1037 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ZNF783Q6ZMS7 281 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 Q6ZVU0 165 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 FAM124AQ86V42 546 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 OR8K1Q8NGG5 319 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 PIGKQ92643 395 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 PPP1R9BQ96SB3 815 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 C2orf49Q9BVC5 232 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 GPR174Q9BXC1 333 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 RBSNQ9H1K0 784 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 PABPC3Q9H361 631 aaKnown RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 NOL6Q9H6R4 1146 aaKnown RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 VPS45Q9NRW7 570 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ABHD10Q9NUJ1 306 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 TMEM248Q9NWD8 314 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 SERGEFQ9UGK8 458 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 PILRBQ9UKJ0 227 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 MID1O15344 667 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 NDUFS2O75306 463 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 LRCH4O75427 683 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 DNTTP04053 509 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 CYP1A2P05177 515 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 TCF4P15884 667 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 MIPP30301 263 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 OXTRP30559 389 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 ACSL1P33121 698 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 NNMTP40261 264 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 PSMD8P48556 350 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 AIF1P55008 147 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 KRT83P78385 493 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 ARF5P84085 180 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 ZBTB16Q05516 673 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 GFPT1Q06210 699 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 ELAVL3Q14576 367 aaKnown RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 DLG2Q15700 870 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 CST6Q15828 149 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 GAS2L3Q86XJ1 694 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 SYT12Q8IV01 421 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 MMAAQ8IVH4 418 aaKnown RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 ZNF419Q96HQ0 510 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 SNRNP25Q9BV90 132 aaKnown RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 ACE2Q9BYF1 805 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 MRPL47Q9HD33 250 aaKnown RBP13.73□□□□□ -0.21
RPAIN-207ENST00000570883 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 AP4E1Q9UPM8 1137 aa13.73□□□□□ -0.21
RPAIN-207ENST00000570883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 LNP1A1A4G5 178 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 CBX4O00257 560 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 CREB3O43889 395 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 ZNF821O75541 412 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 EPHB2P29323 1055 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 GALCP54803 685 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 ADKP55263 362 aaKnown RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 RSPO4Q2I0M5 234 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 TTC31Q49AM3 519 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 CCDC122Q5T0U0 273 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 C22orf39Q6P5X5 142 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 AADATQ8N5Z0 425 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 RTL3Q8N8U3 475 aaKnown RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 BTBD6Q96KE9 485 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 KCTD15Q96SI1 283 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-207ENST00000570883 CHP1Q99653 195 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 EPAS1Q99814 870 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 NUP85Q9BW27 656 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 PACSIN1Q9BY11 444 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 TRIM5Q9C035 493 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 SARDHQ9UL12 918 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 ACTL7AQ9Y615 435 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 CABIN1Q9Y6J0 2220 aa13.72□□□□□ -0.21
RPAIN-207ENST00000570883 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.21
RPAIN-207ENST00000570883 A0A1W2PP55 124 aa13.71□□□□□ -0.21
RPAIN-207ENST00000570883 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
RPAIN-207ENST00000570883 PRR5-ARHGAP8B1AHC4 643 aa13.71□□□□□ -0.21
RPAIN-207ENST00000570883 FOXD2O60548 495 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-207ENST00000570883 RNASEH1O60930 286 aaKnown RBP13.71□□□□□ -0.21
RPAIN-207ENST00000570883 CD160O95971 181 aa13.71□□□□□ -0.21
RPAIN-207ENST00000570883 DESP17661 470 aa13.71□□□□□ -0.21
RPAIN-207ENST00000570883 MAOBP27338 520 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms