RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 MIPP30301 263 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 HTR7P34969 479 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 PCK1P35558 622 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 DHPSP49366 369 aaPredicted RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 CREB5Q02930 508 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 ZNF33AQ06730 810 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 SLC20A2Q08357 652 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 ELAVL3Q14576 367 aaKnown RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 DLG2Q15700 870 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 CST6Q15828 149 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 CCDC6Q16204 474 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 ERMARDQ5T6L9 678 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 PEAR1Q5VY43 1037 aaPredicted RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 PRR23CQ6ZRP0 262 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 CACUL1Q86Y37 369 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 PSTKQ8IV42 348 aaKnown RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 CNGA4Q8IV77 575 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 SLC41A1Q8IVJ1 513 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 NIPA2Q8N8Q9 360 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 CADM4Q8NFZ8 388 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 ARHGEF2Q92974 986 aaKnown RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 EIF3CQ99613 913 aaKnown RBP11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 EPAS1Q99814 870 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 VPS45Q9NRW7 570 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 TMEM74BQ9NUR3 256 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 PCSK1NQ9UHG2 260 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 USP18Q9UMW8 372 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
SHCBP1-207ENST00000569702 TNRC6BQ9UPQ9 1833 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 K7ERQ8 282 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 SMAD6O43541 496 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 CREB3O43889 395 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 PRPSAP2O60256 369 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 RNASEH1O60930 286 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ZNF821O75541 412 aaPredicted RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 CD160O95971 181 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 GLDCP23378 1020 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ITPKAP23677 461 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ACSL1P33121 698 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ACVRL1P37023 503 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ETFBP38117 255 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 CLCN6P51797 869 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ARF5P84085 180 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 LMNB2Q03252 620 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 PIGHQ14442 188 aaPredicted RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 SF3A2Q15428 464 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 CA9Q16790 459 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ACCSLQ4AC99 568 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 LYSMD4Q5XG99 296 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 USP30Q70CQ3 517 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 CYP2U1Q7Z449 544 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 SYT12Q8IV01 421 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 STK40Q8N2I9 435 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 RTL3Q8N8U3 475 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 TC2NQ8N9U0 490 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ATP11CQ8NB49 1132 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 FOXJ1Q92949 421 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 SPON2Q9BUD6 331 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 SNRNP25Q9BV90 132 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 NUP85Q9BW27 656 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 GPR174Q9BXC1 333 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 PCED1AQ9H1Q7 454 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 MAGEH1Q9H213 219 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 PABPC3Q9H361 631 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 NOL6Q9H6R4 1146 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 NHEJ1Q9H9Q4 299 aaPredicted RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ATP13A1Q9HD20 1204 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 GPATCH2LQ9NWQ4 482 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 DNAI1Q9UI46 699 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 ANAPC7Q9UJX3 599 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 PILRBQ9UKJ0 227 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 NUMA1Q14980 2115 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
SHCBP1-207ENST00000569702 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 PRR5-ARHGAP8B1AHC4 643 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 CBX4O00257 560 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 MCF2LO15068 1137 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 ALOX15BO15296 676 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 MID1O15344 667 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 AKR1B10O60218 316 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 RAMP2O60895 175 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 NDUFS2O75306 463 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 ADH1BP00325 375 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 TCF4P15884 667 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 C5AR1P21730 350 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 IL1R2P27930 398 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 SLC8A1P32418 973 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 HOXD12P35452 270 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 DPP6P42658 865 aa11.32□□□□□ -0.6
SHCBP1-207ENST00000569702 ZNF75DP51815 510 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms