RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 JCHAINP01591 159 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ZDHHC11BP0C7U3 371 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CSH1P0DML2 217 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CSH2P0DML3 217 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ADRA1DP25100 572 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 DNAJB1P25685 340 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MGAT1P26572 445 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PSMB4P28070 264 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 EPHB2P29323 1055 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 HADHAP40939 763 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MAGEA12P43365 314 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 POLD2P49005 469 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 TUBP50607 506 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SLC5A3P53794 718 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ELAVL2Q12926 359 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 GPR17Q13304 367 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 RIPK1Q13546 671 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PRPSAP1Q14558 356 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ANKRD20A4Q4UJ75 823 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 KYAT3Q6YP21 454 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 LRRC8DQ7L1W4 858 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 OTOAQ7RTW8 1153 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 TMC7Q7Z402 723 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ARHGAP12Q8IWW6 846 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CTAGE3PQ8IX95 158 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 TP53INP2Q8IXH6 220 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF683Q8IZ20 524 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 UMODL1-AS1Q8N2C9 162 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 NPWQ8N729 165 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CNTD1Q8N815 330 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CCDC63Q8NA47 563 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MAGEC3Q8TD91 643 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 C2orf15Q8WU43 125 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 FOXJ1Q92949 421 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 FCRL2Q96LA5 508 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SERPINB11Q96P15 392 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CASD1Q96PB1 797 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 FAM193BQ96PV7 902 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 FCRL5Q96RD9 977 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SRPK1Q96SB4 655 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 CPNE1Q99829 537 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 GORASP1Q9BQQ3 440 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 TMEM175Q9BSA9 504 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MCMBPQ9BTE3 642 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MLPHQ9BV36 600 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 KIFC1Q9BW19 673 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 RHOBTB2Q9BYZ6 727 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 NMUR1Q9HB89 426 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PAK6Q9NQU5 681 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 STARD7Q9NQZ5 370 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SAR1AQ9NR31 198 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 COX16Q9P0S2 106 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SIRPGQ9P1W8 387 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 KLHL8Q9P2G9 620 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SLC17A7Q9P2U7 560 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PPARGC1AQ9UBK2 798 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 TSR3Q9UJK0 312 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 NEU3Q9UQ49 428 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 TLR6Q9Y2C9 796 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 INPP5FQ9Y2H2 1132 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MTO1Q9Y2Z2 717 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 AAR2Q9Y312 384 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PCDHB7Q9Y5E2 793 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PCDHB5Q9Y5E4 795 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MAD1L1Q9Y6D9 718 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 FRMPD3Q5JV73 1810 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 IGLV3-10A0A075B6K4 115 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ZCWPW2A0A1B0GU75 182 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 F8W810 466 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 H7C4K7 107 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 KCNK1O00180 336 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TRAFD1O14545 582 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 MGRN1O60291 552 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 UGT1A9O60656 530 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 MAFKO60675 156 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 NBNO60934 754 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 DNAJC6O75061 913 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 PIAS1O75925 651 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 DCTN3O75935 186 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ANXA9O76027 345 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 UBOX5O94941 541 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RTN3O95197 1032 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 GSRP00390 522 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CXCL10P02778 98 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ATP5BP06576 529 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 BPGMP07738 259 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TROVE2P10155 538 aaKnown RBP eCLIP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 HAPLN1P10915 354 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CCNB1P14635 433 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RHOQP17081 205 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 HNRNPH1P31943 449 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ADRA1AP35348 466 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 OR1G1P47890 313 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 PGFP49763 221 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 NDST2P52849 883 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SESN2P58004 480 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RING1Q06587 406 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms