RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-217ENST00000569263 DNA2P51530 1060 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 RWDD2BP57060 319 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 GEMIN4P57678 1058 aaKnown RBP13.36□□□□□ -0.27
CNOT1-217ENST00000569263 SATB1Q01826 763 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 PTPRNQ16849 979 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 RETSATQ6NUM9 610 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 VSIG1Q86XK7 387 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 RFX6Q8HWS3 928 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 TRIM58Q8NG06 486 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 EXD1Q8NHP7 514 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 HMCESQ96FZ2 354 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 RPL10LQ96L21 214 aaKnown RBP13.36□□□□□ -0.27
CNOT1-217ENST00000569263 PSMB7Q99436 277 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 POLMQ9NP87 494 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-217ENST00000569263 ETNK2Q9NVF9 386 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 MFHAS1Q9Y4C4 1052 aa13.36□□□□□ -0.27
CNOT1-217ENST00000569263 SHROOM3Q8TF72 1996 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ZSCAN5CA6NGD5 496 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 WASH3PC4AMC7 463 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ZBTB24O43167 697 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 SYNCRIPO60506 623 aaKnown RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ADAM23O75077 832 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 HLA-EP13747 358 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 GLDCP23378 1020 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 PRKCHP24723 683 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 DGKEP52429 567 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 NUBP1P53384 320 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 NCBP2-AS2Q69YL0 99 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 NPWQ8N729 165 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ZNF366Q8N895 744 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ATP11CQ8NB49 1132 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 KDM1BQ8NB78 822 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 TSTD1Q8NFU3 115 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 PCDH19Q8TAB3 1148 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 FAF2Q96CS3 445 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 MRGPRX3Q96LB0 322 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 HHIPQ96QV1 700 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 GABRG3Q99928 467 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 ACE2Q9BYF1 805 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 SLC39A8Q9C0K1 460 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 NOL6Q9H6R4 1146 aaKnown RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 LRRC19Q9H756 370 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 SP110Q9HB58 689 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 TRMT1Q9NXH9 659 aaKnown RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 SUN2Q9UH99 717 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 PYCARDQ9ULZ3 195 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 PACSIN2Q9UNF0 486 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
CNOT1-217ENST00000569263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
CNOT1-217ENST00000569263 GOLGA6L9A6NEM1 432 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 C3orf70A6NLC5 250 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 APOL1O14791 398 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 KDELR3O43731 214 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 MFSD11O43934 449 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ALDH1A2O94788 518 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 CDKN2BP42772 138 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 PAPOLAP51003 745 aaKnown RBP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ARF5P84085 180 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 SERINC3Q13530 473 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ENPP2Q13822 863 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 TFDP2Q14188 446 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 CRY1Q16526 586 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 TFDP3Q5H9I0 405 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 TMEM92Q6UXU6 159 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 LINGO4Q6UY18 593 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 REXO1L1PQ8IX06 675 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 SH2D3CQ8N5H7 860 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 NETO2Q8NC67 525 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 UBE2Q2Q8WVN8 375 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 KLC2Q9H0B6 622 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 TMEM245Q9H330 911 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 PRMT8Q9NR22 394 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 POLR3BQ9NW08 1133 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 C2orf42Q9NWW7 574 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 BCCIPQ9P287 314 aaKnown RBP eCLIP13.34□□□□□ -0.27
CNOT1-217ENST00000569263 SLCO3A1Q9UIG8 710 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 HS3ST2Q9Y278 367 aa13.34□□□□□ -0.27
CNOT1-217ENST00000569263 ZNF318Q5VUA4 2279 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 CXorf51AA0A1B0GTR3 108 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 TCRBV21S2A2A0A5A6 115 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 TTC34A8MYJ7 566 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-217ENST00000569263 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
CNOT1-217ENST00000569263 PAPSS2O95340 614 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms