RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 TFDP2Q14188 446 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ZNF234Q14588 700 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 LLGL1Q15334 1064 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 PTPRNQ16849 979 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 HSF5Q4G112 596 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-224ENST00000568877 KAZNQ674X7 775 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 TRMT11Q7Z4G4 463 aaKnown RBP17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ZNF354CQ86Y25 554 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 TP53INP2Q8IXH6 220 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 SLC35F6Q8N357 371 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 C17orf53Q8N3J3 647 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ALLCQ8N6M5 410 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 IL17RCQ8NAC3 791 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 NETO2Q8NC67 525 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ACOX2Q99424 681 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 TLR10Q9BXR5 811 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ZDHHC4Q9NPG8 344 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 VPS51Q9UID3 782 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 HPCAL4Q9UM19 191 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 EFR3BQ9Y2G0 817 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 F5P12259 2224 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 CHURC1-FNTBB4DL54 471 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 DFFAO00273 331 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 DLL1O00548 723 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 CST8O60676 142 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 GPR37L1O60883 481 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 ATG13O75143 517 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 KLF8O95600 359 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-224ENST00000568877 NTSR1P30989 418 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 PTPN7P35236 360 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 DYNLT1P63172 113 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-224ENST00000568877 GAS6Q14393 721 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 FNDC3BQ53EP0 1204 aaKnown RBP17.12■□□□□ 0.33
COMMD4-224ENST00000568877 DCAF12L1Q5VU92 463 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 RETSATQ6NUM9 610 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 CHPFQ8IZ52 775 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 PLD5Q8N7P1 536 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 KDM1BQ8NB78 822 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
COMMD4-224ENST00000568877 RPL10LQ96L21 214 aaKnown RBP17.12■□□□□ 0.33
COMMD4-224ENST00000568877 MRGPRX3Q96LB0 322 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 HEMGNQ9BXL5 484 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 OSBPL8Q9BZF1 889 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 SLC25A13Q9UJS0 675 aa17.12■□□□□ 0.33
COMMD4-224ENST00000568877 CXorf51AA0A1B0GTR3 108 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 PRR33A8MZF0 331 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 MFSD11O43934 449 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 NNMTP40261 264 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 IL12RB1P42701 662 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 STK19P49842 368 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-224ENST00000568877 VASPP50552 380 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-224ENST00000568877 ST8SIA6P61647 398 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 GNG11P61952 73 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 ARF5P84085 180 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 GBE1Q04446 702 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 SLC20A2Q08357 652 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 ADCY2Q08462 1091 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 ENPP2Q13822 863 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 SDE2Q6IQ49 451 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 AADACL2Q6P093 401 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 LINGO4Q6UY18 593 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 MYO19Q96H55 970 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 TMEM245Q9H330 911 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 CACNA2D2Q9NY47 1150 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 SLCO3A1Q9UIG8 710 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 ZKSCAN5Q9Y2L8 839 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 STON1Q9Y6Q2 735 aa17.11■□□□□ 0.33
COMMD4-224ENST00000568877 ZSCAN5CA6NGD5 496 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-224ENST00000568877 WASH3PC4AMC7 463 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 SGK1O00141 431 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 KCNK3O14649 394 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 ENC1O14682 589 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 ADAM23O75077 832 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 MT-CO1P00395 513 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 WASP42768 502 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 GEMIN4P57678 1058 aaKnown RBP17.1■□□□□ 0.33
COMMD4-224ENST00000568877 GALNT2Q10471 571 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-224ENST00000568877 MTAPQ13126 283 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 TMEM31Q5JXX7 168 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 EOGTQ5NDL2 527 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 SERPINA13PQ6UXR4 307 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 ARHGAP36Q6ZRI8 547 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 LRRC49Q8IUZ0 686 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 SPEM1Q8N4L4 309 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 GABRG3Q99928 467 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 CARD9Q9H257 536 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 DTLQ9NZJ0 730 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.1■□□□□ 0.33
COMMD4-224ENST00000568877 IPO11Q9UI26 975 aaKnown RBP17.1■□□□□ 0.33
COMMD4-224ENST00000568877 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 HS3ST2Q9Y278 367 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms