RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 AP3B1O00203 1094 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 PSMD3O43242 534 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 MAP3K6O95382 1288 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 ATF6P18850 670 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 CCNCP24863 283 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 MAGEA3P43357 314 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 TUBP50607 506 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 GLIPR1L2Q4G1C9 344 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 C10orf120Q5SQS8 335 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 FNBP1LQ5T0N5 605 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 TIGD7Q6NT04 549 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-221ENST00000567935 RWDD4Q6NW29 188 aaKnown RBP14.96□□□□□ -0.01
COMMD4-221ENST00000567935 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 CCDC13Q8IYE1 715 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 DCLK2Q8N568 766 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 RTL3Q8N8U3 475 aaKnown RBP14.96□□□□□ -0.01
COMMD4-221ENST00000567935 STKLD1Q8NE28 680 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 FBXO36Q8NEA4 188 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 UHMK1Q8TAS1 419 aaKnown RBP14.96□□□□□ -0.01
COMMD4-221ENST00000567935 FATE1Q969F0 183 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 ZBTB9Q96C00 473 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.01
COMMD4-221ENST00000567935 MYRFLQ96LU7 910 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 CLSTN3Q9BQT9 956 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 CRISPLD1Q9H336 500 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 TLE6Q9H808 572 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 SENP1Q9P0U3 644 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 NEU3Q9UQ49 428 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 PCDHB12Q9Y5F1 795 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 HS3ST4Q9Y661 456 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.96□□□□□ -0.01
COMMD4-221ENST00000567935 TEX264Q9Y6I9 313 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 R4GN57 208 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 E9PAM4 449 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 MSI1O43347 362 aaKnown RBP14.95□□□□□ -0.02
COMMD4-221ENST00000567935 METTL18O95568 372 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 ASGR2P07307 311 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 RHOQP17081 205 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 STX2P32856 288 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 MDH1P40925 334 aaKnown RBP14.95□□□□□ -0.02
COMMD4-221ENST00000567935 MMP13P45452 471 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 ALDH1A3P47895 512 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 PGFP49763 221 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 NDST2P52849 883 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 WASHC5Q12768 1159 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 EFEMP1Q12805 493 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 PLD1Q13393 1074 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 FASTKD3Q14CZ7 662 aaKnown RBP14.95□□□□□ -0.02
COMMD4-221ENST00000567935 LONRF1Q17RB8 773 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 NPWQ8N729 165 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 FLCNQ8NFG4 579 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 NAT9Q9BTE0 207 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 SIK2Q9H0K1 926 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 ACSS3Q9H6R3 686 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 MRPL17Q9NRX2 175 aaKnown RBP14.95□□□□□ -0.02
COMMD4-221ENST00000567935 KLHL8Q9P2G9 620 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-221ENST00000567935 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-221ENST00000567935 DNMT3LQ9UJW3 386 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 SPTBN2O15020 2390 aa14.95□□□□□ -0.02
COMMD4-221ENST00000567935 MYO10Q9HD67 2058 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 IGLV3-10A0A075B6K4 115 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 SMIM23A6NLE4 172 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 TRDMT1O14717 391 aaKnown RBP14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ADAM12O43184 909 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 TLR5O60602 858 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 PTPN3P26045 913 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ELF1P32519 619 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 HPDP32754 393 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ATP5C1P36542 298 aaKnown RBP14.94□□□□□ -0.02
COMMD4-221ENST00000567935 NRLP54845 237 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 GEMIN4P57678 1058 aaKnown RBP14.94□□□□□ -0.02
COMMD4-221ENST00000567935 IFI35P80217 286 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-221ENST00000567935 PRPSAP1Q14558 356 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ANO4Q32M45 955 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 MSS51Q4VC12 460 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 AFMIDQ63HM1 303 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 LRRC8BQ6P9F7 803 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 LEKR1Q6ZMV7 388 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 C3orf62Q6ZUJ4 267 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 B4GALNT4Q76KP1 1039 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 PID1Q7Z2X4 250 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ZNF567Q8N184 647 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ATPAF2Q8N5M1 289 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 AZIN2Q96A70 460 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 CYTH2Q99418 400 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 GBA3Q9H227 469 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 EURLQ9NYK6 297 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 SNX10Q9Y5X0 201 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 ATRXP46100 2492 aa14.94□□□□□ -0.02
COMMD4-221ENST00000567935 USP24Q9UPU5 2620 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 SLC12A8A0AV02 714 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 SOAT2O75908 522 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 CPP00450 1065 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 AOC1P19801 751 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 ELK3P41970 407 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 SLCO1A2P46721 670 aa14.93□□□□□ -0.02
COMMD4-221ENST00000567935 GPX6P59796 221 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms