RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 GABRB2P47870 512 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 MAPRE2Q15555 327 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 FAM187BQ17R55 369 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 TEX44Q53QW1 395 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ARHGAP17Q68EM7 881 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 RBM15BQ8NDT2 890 aaKnown RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 TUBGCP3Q96CW5 907 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 ARHGEF3Q9NR81 526 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 TMEM216Q9P0N5 145 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 KCNH4Q9UQ05 1017 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 AKAP10O43572 662 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 FGFR1P11362 822 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ATP6V1B1P15313 513 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 CRHR1P34998 444 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 CD86P42081 329 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 KCNJ11Q14654 390 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 MRNIPQ6NTE8 343 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 SDCCAG3Q96C92 435 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 BRD8Q9H0E9 1235 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ABCC13Q9NSE7 274 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 NRAPQ86VF7 1730 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 CBX4O00257 560 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 HOXD10P28358 340 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 HADHAP40939 763 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 GRIA4P48058 902 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 PCBP1Q15365 356 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH1-210ENST00000566612 BNC2Q6ZN30 1099 aaPredicted RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 RIPOR1Q6ZS17 1223 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ARCQ7LC44 396 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 ARFGAP1Q8N6T3 406 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 CINPQ9BW66 212 aaPredicted RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 SMPD4Q9NXE4 827 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 CCDC167Q9P0B6 97 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 HBS1LQ9Y450 684 aaKnown RBP11.79□□□□□ -0.52
CDH1-210ENST00000566612 SLC30A1Q9Y6M5 507 aa11.79□□□□□ -0.52
CDH1-210ENST00000566612 TRPC5OSA6NMA1 111 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 F5H5T6 163 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PRRG1O14668 218 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 CDK7P50613 346 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 RIPK1Q13546 671 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PEX6Q13608 980 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 VEPH1Q14D04 833 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 KHDC1Q4VXA5 237 aaKnown RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 C6orf10Q5SRN2 563 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 RAP1GAP2Q684P5 730 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 RFWD3Q6PCD5 774 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 RINLQ6ZS11 566 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 KYQ8NBH2 561 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 GSTCDQ8NEC7 633 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 SCAMP5Q8TAC9 235 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 SERPINB11Q96P15 392 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 FZD10Q9ULW2 581 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PADI3Q9ULW8 664 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 PAGE1O75459 146 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 HNRNPLP14866 589 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDH1-210ENST00000566612 PAX7P23759 505 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 CCDC15Q0P6D6 951 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 NCBP2-AS2Q69YL0 99 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 ACMSDQ8TDX5 336 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 CADM1Q9BY67 442 aaKnown RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 TAS2R1Q9NYW7 299 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PGAP2Q9UHJ9 254 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 DTNAQ9Y4J8 743 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PCDHB5Q9Y5E4 795 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 PRRC2BQ5JSZ5 2229 aaKnown RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 F8W8V4 182 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 STX7O15400 261 aaKnown RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 KPNA6O60684 536 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 SRP72O76094 671 aaKnown RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 POLD3Q15054 466 aaPredicted RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 SGO1Q5FBB7 561 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 CLEC20AQ6ZU45 233 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 GPR63Q9BZJ6 419 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 XPR1Q9UBH6 696 aa11.78□□□□□ -0.52
CDH1-210ENST00000566612 MYO18AQ92614 2054 aaKnown RBP11.78□□□□□ -0.52
CDH1-210ENST00000566612 CCL22O00626 93 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 TYROBPO43914 113 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 GLP2RO95838 553 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 ALDH2P05091 517 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 CCDC166P0CW27 439 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms