RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 BNIPLQ7Z465 357 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 GATAD2AQ86YP4 633 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 ZDHHC17Q8IUH5 632 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 CPA5Q8WXQ8 436 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 C18orf8Q96DM3 657 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 ACE2Q9BYF1 805 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-209ENST00000565511 PDCL3Q9H2J4 239 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 WDCPQ9H6R7 721 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 AASDHPPTQ9NRN7 309 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 VPS51Q9UID3 782 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 SLC25A13Q9UJS0 675 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 TMEM59LQ9UK28 342 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 NOCTQ9UK39 431 aaKnown RBP24.38■■□□□ 1.49
RAB40C-209ENST00000565511 PPM1HQ9ULR3 514 aa24.38■■□□□ 1.49
RAB40C-209ENST00000565511 ARID1BQ8NFD5 2236 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-209ENST00000565511 A0A1B0GTQ1 180 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 CBX4O00257 560 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 LATO43561 262 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 GLDCP23378 1020 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 RDXP35241 583 aaKnown RBP24.37■■□□□ 1.49
RAB40C-209ENST00000565511 NNMTP40261 264 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 OXCT1P55809 520 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 C21orf59P57076 290 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 DEUP1Q05D60 604 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 SCAPQ12770 1279 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 ACCSLQ4AC99 568 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 BRMS1LQ5PSV4 323 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 NAA35Q5VZE5 725 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 TFAP2DQ7Z6R9 452 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 ERICH1Q86X53 443 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 PIP4K2CQ8TBX8 421 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 OR8D1Q8WZ84 308 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 CFAP57Q96MR6 1250 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 ARHGAP20Q9P2F6 1191 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 ZNF212Q9UDV6 495 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 DACH1Q9UI36 760 aa24.37■■□□□ 1.49
RAB40C-209ENST00000565511 COL5A1P20908 1838 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-209ENST00000565511 A0A0D9SEW6 157 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 DRGXA6NNA5 263 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 SMAD6O43541 496 aaKnown RBP24.36■■□□□ 1.49
RAB40C-209ENST00000565511 BNIP3LO60238 219 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 RHOCP08134 193 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 CHRNB2P17787 502 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 RRM1P23921 792 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 MAT2AP31153 395 aaKnown RBP24.36■■□□□ 1.49
RAB40C-209ENST00000565511 SCNN1AP37088 669 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 SNX16P57768 344 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 SFSWAPQ12872 951 aaKnown RBP24.36■■□□□ 1.49
RAB40C-209ENST00000565511 SLC25A52Q3SY17 297 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 CDKAL1Q5VV42 579 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 SERAC1Q96JX3 654 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 CDC6Q99741 560 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 STK33Q9BYT3 514 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 MUC3BQ9H195 1237 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 VPS16Q9H269 839 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 RRN3Q9NYV6 651 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 STAP1Q9ULZ2 295 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 HS3ST2Q9Y278 367 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 CA5BQ9Y2D0 317 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 LAMA5O15230 3695 aa24.36■■□□□ 1.49
RAB40C-209ENST00000565511 CHD5Q8TDI0 1954 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 PLRG1O43660 514 aaKnown RBP24.35■■□□□ 1.49
RAB40C-209ENST00000565511 GJB6O95452 261 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 EEF1GP26641 437 aaKnown RBP24.35■■□□□ 1.49
RAB40C-209ENST00000565511 CD38P28907 300 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 GRK6P43250 576 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 TAS2R38P59533 333 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 KRT31Q15323 416 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 LINGO4Q6UY18 593 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 PHLDB2Q86SQ0 1253 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 EMC1Q8N766 993 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 OR7D4Q8NG98 312 aa24.35■■□□□ 1.49
RAB40C-209ENST00000565511 ELF4Q99607 663 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-209ENST00000565511 ACACAQ13085 2346 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 IGLV3-10A0A075B6K4 115 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3DA0A087WVF3 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3IA0A087WXS9 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3EA0A087X179 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3KA0A087X1G2 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3FA6NER0 549 aaPredicted RBP24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3LB9A6J9 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 E9PAM4 449 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 MCF2LO15068 1137 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 GFPT2O94808 682 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 LSM8O95777 96 aaKnown RBP24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3HP0C7X1 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 FMO1Q01740 532 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 SUZ12Q15022 739 aaKnown RBP24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3GQ6DHY5 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3CQ6IPX1 549 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 FAM131BQ86XD5 332 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 SPATS2Q86XZ4 545 aaKnown RBP24.34■■□□□ 1.49
RAB40C-209ENST00000565511 TBC1D3Q8IZP1 549 aaPredicted RBP24.34■■□□□ 1.49
RAB40C-209ENST00000565511 CHST14Q8NCH0 376 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 GPT2Q8TD30 523 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 ARRDC3Q96B67 414 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 CAAP1Q9H8G2 361 aa24.34■■□□□ 1.49
RAB40C-209ENST00000565511 METTL5Q9NRN9 209 aaKnown RBP24.34■■□□□ 1.49
RAB40C-209ENST00000565511 JAM2P57087 298 aa24.33■■□□□ 1.49
RAB40C-209ENST00000565511 NXPH1P58417 271 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms