RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KLK6Q92876 244 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 CATSPER2Q96P56 530 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 GFM1Q96RP9 751 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 MYOCQ99972 504 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 FAM13BQ9NYF5 915 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 PISDQ9UG56 409 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 INTS6Q9UL03 887 aaKnown RBP9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 PADI4Q9UM07 663 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 VPS4AQ9UN37 437 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
VPS9D1-205ENST00000565452 PLXNA2O75051 1894 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 A0A087X0B3 334 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 SPTY2D1-AS1A0A0U1RR47 76 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 GOLGA6L4A6NEF3 574 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 A6NNZ2 444 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 C1QTNF3-AMACRE9PGA6 284 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 ZBED1O96006 694 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 NME1P15531 152 aaKnown RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 PRLRP16471 622 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 WT1P19544 449 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CTSOP43234 321 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CYP2J2P51589 502 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 SGSHP51688 502 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 SLC8A3P57103 927 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CLDN2P57739 230 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CDH18Q13634 790 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 FOXD4L6Q3SYB3 417 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 PITRM1Q5JRX3 1037 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 PM20D1Q6GTS8 502 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 FOXD4L3Q6VB84 417 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 ABI3BPQ7Z7G0 1075 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 HORMAD1Q86X24 394 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 TICAM1Q8IUC6 712 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CARNMT1Q8N4J0 409 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 HJURPQ8NCD3 748 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 AZIN2Q96A70 460 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 RPL10LQ96L21 214 aaKnown RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 BOCQ9BWV1 1114 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 B3GNT4Q9C0J1 378 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CUEDC2Q9H467 287 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 CUEDC1Q9NWM3 386 aaPredicted RBP9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 SPASTQ9UBP0 616 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 SFMBT1Q9UHJ3 866 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 PPM1HQ9ULR3 514 aa9.32□□□□□ -0.92
VPS9D1-205ENST00000565452 PRAMEF33A0A0G2JMD5 474 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 GOLGA6L7A0A1B0GV03 622 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 FRMD3A2A2Y4 597 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ACSL4O60488 711 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 PRAMEF10O60809 474 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 DDAH2O95865 285 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 C4BPAP04003 597 aaKnown RBP9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ANXA6P08133 673 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 HGFP14210 728 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 JUNDP17535 347 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ATP1A2P50993 1020 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 PDX1P52945 283 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ADKP55263 362 aaKnown RBP9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 AMPD3Q01432 767 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 SULT2A1Q06520 285 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 KLRB1Q12918 225 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 FZD2Q14332 565 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ZNF284Q2VY69 593 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ACCSLQ4AC99 568 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 AGBL4Q5VU57 503 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 RESP18Q5W5W9 173 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 NUGGCQ68CJ6 796 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ZNF787Q6DD87 383 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 PTAR1Q7Z6K3 402 aaPredicted RBP9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 B3GNT8Q7Z7M8 397 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 PARGQ86W56 976 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 HEATR4Q86WZ0 1026 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 SRRM1Q8IYB3 904 aaKnown RBP9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 SLC22A18ASQ8N1D0 253 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 IQUBQ8NA54 791 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 TEX19Q8NA77 164 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 SCG3Q8WXD2 468 aaKnown RBP9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 USP7Q93009 1102 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ELMO3Q96BJ8 720 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 CCDC34Q96HJ3 373 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 EPSTI1Q96J88 318 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 CLIC6Q96NY7 704 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 NOX5Q96PH1 765 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 CMKLR1Q99788 373 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 FGFBP2Q9BYJ0 223 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 FOXP3Q9BZS1 431 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 HMGXB4Q9UGU5 601 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 SARDHQ9UL12 918 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 LOXL2Q9Y4K0 774 aa9.31□□□□□ -0.92
VPS9D1-205ENST00000565452 ITPR3Q14573 2671 aa9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 FAM237AA0A1B0GTK4 181 aa9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 A1L4Q6 167 aa9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 MCF2LO15068 1137 aa9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 CLIC2O15247 247 aa9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS9D1-205ENST00000565452 CAPN5O15484 640 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms