RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CCSER2Q9H7U1 834 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 GLOD4Q9HC38 313 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 CHRAC1Q9NRG0 131 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 MARCH2Q9P0N8 246 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 ZFATQ9P243 1243 aa19.5■□□□□ 0.71
SMPD3-203ENST00000563226 WASH4PA8MWX3 477 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 CCL5P13501 91 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 ELAVL2Q12926 359 aaKnown RBP19.49■□□□□ 0.71
SMPD3-203ENST00000563226 TRIP4Q15650 581 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-203ENST00000563226 GALNTL6Q49A17 601 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 ANKS3Q6ZW76 656 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 LRRC43Q8N309 656 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMPD3-203ENST00000563226 C10orf82Q8WW14 230 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 SPATA17Q96L03 361 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 VN1R3Q9BXE9 311 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 TLR8Q9NR97 1041 aaKnown RBP19.49■□□□□ 0.71
SMPD3-203ENST00000563226 SAGE1Q9NXZ1 904 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 BPTFQ12830 3046 aa19.49■□□□□ 0.71
SMPD3-203ENST00000563226 CCDC78A2IDD5 438 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 H7C4K7 107 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 TPP1O14773 563 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 USP1O94782 785 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 ITGA2BP08514 1039 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 SLC2A3P11169 496 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 CNTFP26441 200 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 NAB1Q13506 487 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 FBXW10Q5XX13 1052 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 RAP1GAP2Q684P5 730 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 IGSF8Q969P0 613 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 AZIN2Q96A70 460 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 ZNF778Q96MU6 729 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 FCRL5Q96RD9 977 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 AGAP2Q99490 1192 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 NPHS2Q9NP85 383 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 COL4A6Q14031 1691 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 SLC12A8A0AV02 714 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 GMPRP36959 345 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 NPY2RP49146 381 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 CDH17Q12864 832 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 TRIM60Q495X7 471 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 CES4AQ5XG92 561 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 NAPEPLDQ6IQ20 393 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 CIR1Q86X95 450 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-203ENST00000563226 FBXO22Q8NEZ5 403 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 IPMKQ8NFU5 416 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 MYEOVQ96EZ4 313 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 PLCD4Q9BRC7 762 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 RXFP1Q9HBX9 757 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 HAUS2Q9NVX0 235 aa19.48■□□□□ 0.71
SMPD3-203ENST00000563226 RBM22Q9NW64 420 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMPD3-203ENST00000563226 IPO11Q9UI26 975 aaKnown RBP19.48■□□□□ 0.71
SMPD3-203ENST00000563226 H0YHG0 523 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 PEX11BO96011 259 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 NMBRP28336 390 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 CRHR1P34998 444 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 MNX1P50219 401 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-203ENST00000563226 TLE2Q04725 743 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 FBXL22Q6P050 247 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 SLC39A5Q6ZMH5 540 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 ANKRD33Q7Z3H0 272 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 PACS2Q86VP3 889 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 ATP6V0D2Q8N8Y2 350 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 HMCESQ96FZ2 354 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 TBL1YQ9BQ87 522 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 TSSK1BQ9BXA7 367 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 ZYG11BQ9C0D3 744 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 IL22Q9GZX6 179 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 SOX13Q9UN79 622 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 FAM237BA0A1B0GVD1 139 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 SLC38A8A6NNN8 435 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 EFEMP2O95967 443 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 IGLV3-27P01718 113 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 GSTA1P08263 222 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 ZDHHC11BP0C7U3 371 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 RHOQP17081 205 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 GP5P40197 560 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 ABCG1P45844 678 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 PDE1CQ14123 709 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-203ENST00000563226 HSP90AA5PQ58FG0 334 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 UMODL1-AS1Q8N2C9 162 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 RFWD2Q8NHY2 731 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 VWCEQ96DN2 955 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 ATXN7L3BQ96GX2 97 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 BTN2A3PQ96KV6 586 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 FICDQ9BVA6 458 aa19.47■□□□□ 0.71
SMPD3-203ENST00000563226 OLA1Q9NTK5 396 aaKnown RBP19.47■□□□□ 0.71
SMPD3-203ENST00000563226 AAR2Q9Y312 384 aaKnown RBP19.47■□□□□ 0.71
SMPD3-203ENST00000563226 IGLV3-10A0A075B6K4 115 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 J3KR12 359 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 NEFHP12036 1026 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 PSEN1P49768 467 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 TEDDM1Q5T9Z0 273 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 DENND5AQ6IQ26 1287 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 TIGD7Q6NT04 549 aaPredicted RBP19.46■□□□□ 0.71
SMPD3-203ENST00000563226 C16orf46Q6P387 395 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 CPNE1Q99829 537 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 CWH43Q9H720 699 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 TMEM248Q9NWD8 314 aa19.46■□□□□ 0.71
SMPD3-203ENST00000563226 PPARGC1AQ9UBK2 798 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms