RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZNF618Q5T7W0 954 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 OGFRL1Q5TC84 451 aaPredicted RBP13.34□□□□□ -0.27
USB1-207ENST00000563149 SYPL2Q5VXT5 272 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 LIPMQ5VYY2 423 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 NAPEPLDQ6IQ20 393 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 NAPRTQ6XQN6 538 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 HPS6Q86YV9 775 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 KLHDC8BQ8IXV7 354 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 OR6J1Q8NGC5 347 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 GPR22Q99680 433 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 TRIM4Q9C037 500 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
USB1-207ENST00000563149 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 TLK1Q9UKI8 766 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 RNASEH1O60930 286 aaKnown RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 SNAI1O95863 264 aaPredicted RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 FAM200BP0CF97 657 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 RAG1P15918 1043 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 VCLP18206 1134 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 AKAP5P24588 427 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 PIK3R1P27986 724 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 TKTL1P51854 596 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 DAOAP59103 153 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 LILRA4P59901 499 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 GALNT2Q10471 571 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 CDH17Q12864 832 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 PRKAA1Q13131 559 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 DYNC1I2Q13409 638 aaKnown RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 MSLNQ13421 630 aaPredicted RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 SNAPC2Q13487 334 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 SEL1L3Q68CR1 1132 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 ZFP1Q6P2D0 407 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 CLEC20AQ6ZU45 233 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 CATSPER1Q8NEC5 780 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 NCSTNQ92542 709 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 NDRG1Q92597 394 aaKnown RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 AGAP2Q99490 1192 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 OSMRQ99650 979 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 RHOJQ9H4E5 214 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 CNGB3Q9NQW8 809 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 C20orf96Q9NUD7 363 aaPredicted RBP13.33□□□□□ -0.28
USB1-207ENST00000563149 GINS2Q9Y248 185 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 PLXNB2O15031 1838 aa13.33□□□□□ -0.28
USB1-207ENST00000563149 SYNJ2BP-COX16A0A087WUM0 186 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 GOLGA8QA0A0J9YX86 632 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 MBLAC1A4D2B0 266 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 GOLGA8OA6NCC3 632 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 E9PBE3 544 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 GOLGA8NF8WBI6 632 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 H3BNX3 289 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 GABRDO14764 452 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 KLHL41O60662 606 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 DDHD2O94830 711 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 SMPD1P17405 629 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CD68P34810 354 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 NDUFV1P49821 464 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 ERFP50548 548 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 POLE2P56282 527 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 COG7P83436 770 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 TTLL12Q14166 644 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 TRIP10Q15642 601 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 UGP2Q16851 508 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 LPCAT4Q643R3 524 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 KYQ8NBH2 561 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 MFSD3Q96ES6 412 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CDCA5Q96FF9 252 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 TEKT5Q96M29 485 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 TSGA13Q96PP4 275 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 DDX50Q9BQ39 737 aaKnown RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 MED10Q9BTT4 135 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 MLPHQ9BV36 600 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 KIFC1Q9BW19 673 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 C1QTNF1Q9BXJ1 281 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 ACE2Q9BYF1 805 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 FAM49AQ9H0Q0 323 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 VCX3AQ9NNX9 186 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 IARS2Q9NSE4 1012 aaKnown RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 MRGBPQ9NV56 204 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 COX16Q9P0S2 106 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 FAM72CH0Y354 149 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 ATP9BO43861 1147 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CACNG3O60359 315 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 BEST1O76090 585 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms