RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 FAM160A2Q8N612 972 aaPredicted RBP16.81■□□□□ 0.28
PKD1-226ENST00000562425 ZNF366Q8N895 744 aa16.81■□□□□ 0.28
PKD1-226ENST00000562425 RTL3Q8N8U3 475 aaKnown RBP16.81■□□□□ 0.28
PKD1-226ENST00000562425 SNRNP25Q9BV90 132 aaKnown RBP16.81■□□□□ 0.28
PKD1-226ENST00000562425 PACSIN1Q9BY11 444 aa16.81■□□□□ 0.28
PKD1-226ENST00000562425 ATP13A1Q9HD20 1204 aa16.81■□□□□ 0.28
PKD1-226ENST00000562425 IMPACTQ9P2X3 320 aa16.81■□□□□ 0.28
PKD1-226ENST00000562425 DNAI1Q9UI46 699 aa16.81■□□□□ 0.28
PKD1-226ENST00000562425 HPCAL4Q9UM19 191 aa16.81■□□□□ 0.28
PKD1-226ENST00000562425 A0A0D9SEW6 157 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 CXorf51AA0A1B0GTR3 108 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 CBX4O00257 560 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 EEF2KO00418 725 aaKnown RBP16.8■□□□□ 0.28
PKD1-226ENST00000562425 DCLK1O15075 740 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 ATP9BO43861 1147 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 RAMP2O60895 175 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 RETP07949 1114 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 OXTRP30559 389 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 STK19P49842 368 aaPredicted RBP16.8■□□□□ 0.28
PKD1-226ENST00000562425 CLCN6P51797 869 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 COPAP53621 1224 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 GEMIN4P57678 1058 aaKnown RBP16.8■□□□□ 0.28
PKD1-226ENST00000562425 YBEYP58557 167 aaPredicted RBP16.8■□□□□ 0.28
PKD1-226ENST00000562425 SPA17Q15506 151 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 PLK5Q496M5 336 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 ZNF776Q68DI1 518 aaPredicted RBP16.8■□□□□ 0.28
PKD1-226ENST00000562425 TMTC1Q8IUR5 882 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 RHOT2Q8IXI1 618 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 OR7D4Q8NG98 312 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 NETO1Q8TDF5 533 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 RLN3Q8WXF3 142 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 CNTNAP3BQ96NU0 1288 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 CNTNAP3Q9BZ76 1288 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 ITM2CQ9NQX7 267 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 GPATCH2LQ9NWQ4 482 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 VPS51Q9UID3 782 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 SCML1Q9UN30 329 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 HS3ST2Q9Y278 367 aa16.8■□□□□ 0.28
PKD1-226ENST00000562425 MAP1BP46821 2468 aaKnown RBP16.8■□□□□ 0.28
PKD1-226ENST00000562425 WASH4PA8MWX3 477 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 SIN3BO75182 1162 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 PROSCO94903 275 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 IPO7O95373 1038 aaKnown RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 DNTTP04053 509 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 SSR1P43307 286 aaKnown RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 HCAR3P49019 387 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 NUMBP49757 651 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 POLD3Q15054 466 aaPredicted RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 DLG2Q15700 870 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 TTC31Q49AM3 519 aaPredicted RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 PPP6R3Q5H9R7 873 aaPredicted RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 SPDYCQ5MJ68 293 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 C9orf64Q5T6V5 341 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 LPCAT2Q7L5N7 544 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 DSG4Q86SJ6 1040 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 ATP11CQ8NB49 1132 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 SLC35G2Q8TBE7 412 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 TEKT4Q8WW24 435 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 BTBD6Q96KE9 485 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 CCDC114Q96M63 670 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 PEBP4Q96S96 227 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 PSMB7Q99436 277 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 DUSP15Q9H1R2 295 aaPredicted RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 SLC6A17Q9H1V8 727 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 RSPH9Q9H1X1 276 aaPredicted RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 ZWILCHQ9H900 591 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 PARD6AQ9NPB6 346 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 CYP8B1Q9UNU6 501 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 NEU3Q9UQ49 428 aa16.79■□□□□ 0.28
PKD1-226ENST00000562425 FARP1Q9Y4F1 1045 aaPredicted RBP16.79■□□□□ 0.28
PKD1-226ENST00000562425 H3BRJ5 948 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 SLC30A4O14863 429 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 SNAP91O60641 907 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 NDUFS2O75306 463 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 LCA5LO95447 670 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 C7P10643 843 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 ARL4AP40617 200 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 ARHGAP25P42331 645 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 MAGEA1P43355 309 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 RPS14P62263 151 aaKnown RBP16.78■□□□□ 0.28
PKD1-226ENST00000562425 ELAVL3Q14576 367 aaKnown RBP16.78■□□□□ 0.28
PKD1-226ENST00000562425 CA9Q16790 459 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 PMS2CLQ68D20 193 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 RFX8Q6ZV50 586 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 UMODL1-AS1Q8N2C9 162 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 RFFLQ8WZ73 363 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 PTPRN2Q92932 1015 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 ARHGEF2Q92974 986 aaKnown RBP16.78■□□□□ 0.28
PKD1-226ENST00000562425 KCTD15Q96SI1 283 aaPredicted RBP16.78■□□□□ 0.28
PKD1-226ENST00000562425 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
PKD1-226ENST00000562425 MTG2Q9H4K7 406 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 NDFIP2Q9NV92 336 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 USP36Q9P275 1121 aaKnown RBP16.78■□□□□ 0.28
PKD1-226ENST00000562425 NCKAP1Q9Y2A7 1128 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 PCDHGA5Q9Y5G8 931 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
PKD1-226ENST00000562425 IGHV1OR15-9A0A0B4J2B8 117 aa16.77■□□□□ 0.28
PKD1-226ENST00000562425 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.28
PKD1-226ENST00000562425 ZMPSTE24O75844 475 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms