RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 NAGLUP54802 743 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 BST2Q10589 180 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 CYTH1Q15438 398 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 TREML2Q5T2D2 321 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 RIOX2Q8IUF8 465 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 TMEM126BQ8IUX1 230 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 TP53INP2Q8IXH6 220 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 ACVR1CQ8NER5 493 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 DDI1Q8WTU0 396 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 NDRG1Q92597 394 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 ISL2Q96A47 359 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 EFCAB1Q9HAE3 211 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 IARS2Q9NSE4 1012 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 TIMM44O43615 452 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 C22orf31O95567 290 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 KYAT1Q16773 422 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 FAM187BQ17R55 369 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 STRADAQ7RTN6 431 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 CLEC14AQ86T13 490 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 KCNMB4Q86W47 210 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 FBXO16Q8IX29 292 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 DEFB106AQ8N104 65 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 FAM156AQ8NDB6 213 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 NLRP7Q8WX94 980 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 DLG3Q92796 817 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 EME1Q96AY2 570 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 DRC3Q9H069 523 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 FAM124BQ9H5Z6 455 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 HSFX1Q9UBD0 423 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 GTF2IRD1Q9UHL9 959 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 CYP2C8P10632 490 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 INSRRP14616 1297 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 PGGT1BP53609 377 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 BCAT1P54687 386 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 DCAF6Q58WW2 860 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 LIPMQ5VYY2 423 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 AMIGO2Q86SJ2 522 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 TICAM1Q8IUC6 712 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 PSTKQ8IV42 348 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 CEP70Q8NHQ1 597 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ZSCAN18Q8TBC5 510 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 VPS39Q96JC1 886 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 MPHOSPH6Q99547 160 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 NPAS2Q99743 824 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 APOL2Q9BQE5 337 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 NFKBIZQ9BYH8 718 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ADA2Q9NZK5 511 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 IGSF9Q9P2J2 1179 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ZDHHC2Q9UIJ5 367 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ZCWPW2A0A1B0GU75 182 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 GRID2O43424 1007 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 APOA4P06727 396 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 DPP6P42658 865 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 SLC26A2P50443 739 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 PRKAA1Q13131 559 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 NRF1Q16656 503 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 CERCAMQ5T4B2 595 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 KLRG1Q96E93 195 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 KLHL32Q96NJ5 620 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 SENP6Q9GZR1 1112 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 RBM38Q9H0Z9 239 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 CXCL16Q9H2A7 254 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 RCOR3Q9P2K3 495 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 EPS15L1Q9UBC2 864 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 VPS28Q9UK41 221 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 PHGDHO43175 533 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 BCAS2O75934 225 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 PSMC3P17980 439 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 AVPR1AP37288 418 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 MATKP42679 507 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 NR1H2P55055 460 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 HPCAP84074 193 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 NME3Q13232 169 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ITGA7Q13683 1181 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 KLC3Q6P597 504 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ZYG11AQ6WRX3 759 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 TMEM135Q86UB9 458 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 ANKRD52Q8NB46 1076 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 RNF19AQ9NV58 838 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 LMCD1Q9NZU5 365 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 THEGQ9P2T0 379 aa14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 RUVBL2Q9Y230 463 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-202ENST00000561976 PRSS51A0A1B0GVH4 220 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 H3BSA7 217 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 EEF2KO00418 725 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 AP2A1O95782 977 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 TXNP10599 105 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 TPH1P17752 444 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 PITX1P78337 314 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 PTK2BQ14289 1009 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 USP10Q14694 798 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 ZNF410Q86VK4 478 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 CPSF7Q8N684 471 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 CCNYL1Q8N7R7 359 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 SEMA6AQ9H2E6 1030 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 R3HDMLQ9H3Y0 253 aa14.21□□□□□ -0.13
VPS9D1-202ENST00000561976 CHRAC1Q9NRG0 131 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms