RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TAF5Q15542 800 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 DLG2Q15700 870 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 NEK5Q6P3R8 708 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 ENOSF1Q7L5Y1 443 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 CIR1Q86X95 450 aaPredicted RBP12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 DEFB106AQ8N104 65 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 SLC25A45Q8N413 288 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 TMEM145Q8NBT3 493 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 RPRD1AQ96P16 312 aaPredicted RBP12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 SLC2A13Q96QE2 648 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 INTS2Q9H0H0 1204 aaKnown RBP12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 FAM204AQ9H8W3 233 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 PREBQ9HCU5 417 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 UBE2TQ9NPD8 197 aaPredicted RBP12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 ASNSD1Q9NWL6 643 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 DDIT4Q9NX09 232 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 MAN1B1Q9UKM7 699 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 OR51B4Q9Y5P0 310 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 RAI2Q9Y5P3 530 aa12.16□□□□□ -0.46
CARMIL3-204ENST00000561354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 TRIM38O00635 465 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 THAP12O43422 761 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 BRINP1O60477 761 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 SDC3O75056 442 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 GNA15P30679 374 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 NUMBP49757 651 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 TAS2R38P59533 333 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 CCDC15Q0P6D6 951 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 ZNF177Q13360 481 aaPredicted RBP12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 GSE1Q14687 1217 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 C5orf22Q49AR2 442 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 SMYD5Q6GMV2 418 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 Q6ZVU0 165 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 SH2D3CQ8N5H7 860 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 OR52K2Q8NGK3 314 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 OR4C6Q8NH72 309 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 NELFBQ8WX92 580 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 RNF34Q969K3 372 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 FAM81BQ96LP2 452 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 FCRL3Q96P31 734 aaPredicted RBP12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 KLHL11Q9NVR0 708 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 VPS28Q9UK41 221 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 HS3ST2Q9Y278 367 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 TBC1D30Q9Y2I9 924 aa12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
CARMIL3-204ENST00000561354 TEX51A0A1B0GUA7 166 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 HSF2BPO75031 334 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 CLDN11O75508 207 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 C1QL1O75973 258 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 MT-CO3P00414 261 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 PRB1P04280 392 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 THEGLP0DJG4 465 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF18P17022 549 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 BMP6P22004 513 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 DGKAP23743 735 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 CENPCQ03188 943 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 TBC1D25Q3MII6 688 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 HS1BP3Q53T59 392 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 PIP5KL1Q5T9C9 394 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 GPR155Q7Z3F1 870 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 ERICH1Q86X53 443 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 WDTC1Q8N5D0 677 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 ACP6Q9NPH0 428 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 VANGL2Q9ULK5 521 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 CA5BQ9Y2D0 317 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 HS3ST4Q9Y661 456 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 DOCK9Q9BZ29 2069 aa12.14□□□□□ -0.47
CARMIL3-204ENST00000561354 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 SYNJ2BP-COX16A0A087WUM0 186 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 BECN2A8MW95 431 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 SLC31A1O15431 190 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 PAGE1O75459 146 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CTSLP07711 333 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CKMT1AP12532 417 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 SRCP12931 536 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CHRNA3P32297 505 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 IRAK1P51617 712 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CDH4P55283 916 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 KRT83P78385 493 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 DAB2P98082 770 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 TLE3Q04726 772 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 MORC3Q14149 939 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 CDCP2Q5VXM1 449 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 HORMAD1Q86X24 394 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
CARMIL3-204ENST00000561354 OR2A12Q8NGT7 310 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 494.2 ms