RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 RASA4BC9J798 803 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 RASA4O43374 803 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 PI15O43692 258 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 PRAMEF11O60813 436 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 ZNF189O75820 626 aaPredicted RBP12.39□□□□□ -0.43
IRF9-211ENST00000560852 FTCDO95954 541 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 PEX11BO96011 259 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 PDGFBP01127 241 aaPredicted RBP12.39□□□□□ -0.43
IRF9-211ENST00000560852 KRT1P04264 644 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 TUBB4AP04350 444 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 TGM2P21980 687 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 NTSR1P30989 418 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 ARF5P84085 180 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 IL10RBQ08334 325 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 GALNT2Q10471 571 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 RFTN1Q14699 578 aaPredicted RBP12.39□□□□□ -0.43
IRF9-211ENST00000560852 UBXN2BQ14CS0 331 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 FRS2Q8WU20 508 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
IRF9-211ENST00000560852 OLFM3Q96PB7 478 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 OSBPL8Q9BZF1 889 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 MFSD1Q9H3U5 465 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 FBRSQ9HAH7 460 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 DTLQ9NZJ0 730 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 SUN2Q9UH99 717 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 VPS51Q9UID3 782 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 VPS28Q9UK41 221 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 MMP17Q9ULZ9 603 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 ERVW-1Q9UQF0 538 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 ZKSCAN5Q9Y2L8 839 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 KIAA1549LQ6ZVL6 1849 aa12.39□□□□□ -0.43
IRF9-211ENST00000560852 DOCK4Q8N1I0 1966 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 A0A1W2PQF6 199 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 MAFKO60675 156 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 ADAM23O75077 832 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 RNF40O75150 1001 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 MX2P20592 715 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 CCNCP24863 283 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 AVPR2P30518 371 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 ACVRL1P37023 503 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 PAPOLAP51003 745 aaKnown RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 KDSRQ06136 332 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 NSUN2Q08J23 767 aaKnown RBP eCLIP12.38□□□□□ -0.43
IRF9-211ENST00000560852 SLC10A2Q12908 348 aaPredicted RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 XRCC4Q13426 336 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 ZNF234Q14588 700 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 HNRNPA1L2Q32P51 320 aaKnown RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 EOGTQ5NDL2 527 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 PAPD7Q5XG87 772 aaKnown RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 RASGEF1CQ8N431 466 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 TEX26Q8N6G2 289 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 ZNF513Q8N8E2 541 aaPredicted RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 MAML1Q92585 1016 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 HMCESQ96FZ2 354 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 MAK16Q9BXY0 300 aaKnown RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 FRMD8P1Q9BZ68 369 aaPredicted RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 MUC3BQ9H195 1237 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 ATP13A1Q9HD20 1204 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 TRMT1Q9NXH9 659 aaKnown RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 HPCAL4Q9UM19 191 aa12.38□□□□□ -0.43
IRF9-211ENST00000560852 NDRG2Q9UN36 371 aaKnown RBP12.38□□□□□ -0.43
IRF9-211ENST00000560852 APOC4-APOC2K7ER74 178 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 APOL1O14791 398 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 CST8O60676 142 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 ZNF821O75541 412 aaPredicted RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 TJP3O95049 919 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 APOC2P02655 101 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 NNMTP40261 264 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 CSNK1DP48730 415 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 SERPINH1P50454 418 aaKnown RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 ADCY2Q08462 1091 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 HNRNPDQ14103 355 aaKnown RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 CRY1Q16526 586 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 EGFLAMQ63HQ2 1017 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 NELL1Q92832 810 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 PBKQ96KB5 322 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 CIPCQ9C0C6 399 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 PRMT8Q9NR22 394 aaPredicted RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 EBF1Q9UH73 591 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
IRF9-211ENST00000560852 MFHAS1Q9Y4C4 1052 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 STON1Q9Y6Q2 735 aa12.37□□□□□ -0.43
IRF9-211ENST00000560852 CHD5Q8TDI0 1954 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms