RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MID1O15344 667 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 LRIG2O94898 1065 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 MYBL1P10243 752 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 EPHB2P29323 1055 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 SLC8A1P32418 973 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 ACSL1P33121 698 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 ETFBP38117 255 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 GNA12Q03113 381 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 GFPT1Q06210 699 aaPredicted RBP13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 ARID5BQ14865 1188 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 DUOXA1Q1HG43 343 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 FAM72AQ5TYM5 149 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 PLEKHA7Q6IQ23 1121 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 FAM72DQ6L9T8 149 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 RETSATQ6NUM9 610 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 Q6ZVU0 165 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 DSG4Q86SJ6 1040 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 FAM72BQ86X60 149 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 SH2D3CQ8N5H7 860 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 DCAF4L2Q8NA75 395 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 CADM4Q8NFZ8 388 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 PTPRN2Q92932 1015 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 NTAN1Q96AB6 310 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 CCDC114Q96M63 670 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 EPAS1Q99814 870 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 RTKNQ9BST9 563 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 GTPBP2Q9BX10 602 aaKnown RBP13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 PABPC3Q9H361 631 aaKnown RBP13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNHIT6Q9NWK9 470 aaKnown RBP13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 DLL3Q9NYJ7 618 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 SUSD2Q9UGT4 822 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 PCSK1NQ9UHG2 260 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 FZD10Q9ULW2 581 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 HPCAL4Q9UM19 191 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 OR51B4Q9Y5P0 310 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 DCDC2BA2VCK2 349 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 FSBPO95073 299 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 SEMA4FO95754 770 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 ADH1BP00325 375 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 MT-CO1P00395 513 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 IGLV3-19P01714 112 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 SRCP12931 536 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 RHOQP17081 205 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 GLDCP23378 1020 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 HOXD12P35452 270 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 MAPK8P45983 427 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 RECQLP46063 649 aaPredicted RBP13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 MAPKAPK2P49137 400 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 DNA2P51530 1060 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 AIF1P55008 147 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 OGDHQ02218 1023 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 NRG1Q02297 640 aaPredicted RBP13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 TRIM14Q14142 442 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 POM121L1PQ3SYA9 428 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 HGSNATQ68CP4 663 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNF783Q6ZMS7 281 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 HDDC3Q8N4P3 179 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 FRS2Q8WU20 508 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 FAM129BQ96TA1 746 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 PSMB7Q99436 277 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 SGK2Q9HBY8 427 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 FSCN3Q9NQT6 498 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 DOCK4Q8N1I0 1966 aa13.28□□□□□ -0.28
CTDSPL2-209ENST00000560620 TNRC6BQ9UPQ9 1833 aaKnown RBP13.27□□□□□ -0.28
CTDSPL2-209ENST00000560620 GON4LQ3T8J9 2241 aa13.27□□□□□ -0.28
CTDSPL2-209ENST00000560620 TMEM191CA6NGB0 347 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 METTL12A8MUP2 240 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 C1QTNF3-AMACRE9PGA6 284 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 K7ERQ8 282 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 SLC30A4O14863 429 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 DAPK3O43293 454 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 ATP9BO43861 1147 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 PRPSAP2O60256 369 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 RAMP2O60895 175 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 ENGP17813 658 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 C5AR1P21730 350 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 L1CAMP32004 1257 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 TPI1P60174 286 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 SCAPQ12770 1279 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 POLD3Q15054 466 aaPredicted RBP13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 CCDC122Q5T0U0 273 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 MANEALQ5VSG8 457 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 FAM46CQ5VWP2 391 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 SLC23A3Q6PIS1 610 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 USP30Q70CQ3 517 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZCCHC9Q8N567 271 aaKnown RBP13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 OR14C36Q8NHC7 312 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 TRIM7Q9C029 511 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 THAP2Q9H0W7 228 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 ISCUQ9H1K1 167 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 NEUROG2Q9H2A3 272 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 TNKS2Q9H2K2 1166 aa13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 DHX35Q9H5Z1 703 aaKnown RBP13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 C6orf106Q9H6K1 298 aaPredicted RBP13.27□□□□□ -0.29
CTDSPL2-209ENST00000560620 CATSPERBQ9H7T0 1116 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms