RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 Q6ZSR6 202 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 ABI3BPQ7Z7G0 1075 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 CCDC117Q8IWD4 279 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 LINC00301Q8NCQ3 95 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 TPCN2Q8NHX9 752 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 CLEC4CQ8WTT0 213 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 OR8D1Q8WZ84 308 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC39A13Q96H72 371 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 BMFQ96LC9 184 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 DDX50Q9BQ39 737 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 MMRN2Q9H8L6 949 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 PREBQ9HCU5 417 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 CNGB3Q9NQW8 809 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 GPR27Q9NS67 375 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 EVA1BQ9NVM1 165 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 SEPT3Q9UH03 358 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 XPO7Q9UIA9 1087 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 SALL4Q9UJQ4 1053 aa9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 ZFR2Q9UPR6 939 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-217ENST00000560521 USP9YO00507 2555 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 SPTBN1Q01082 2364 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 SPENQ96T58 3664 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 RNF103O00237 685 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 PIK3R2O00459 728 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 MCF2LO15068 1137 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 MAPK13O15264 365 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 POLR2DO15514 142 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 CSF2P04141 144 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 FYNP06241 537 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 SFTPCP11686 197 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 HNRNPA2B1P22626 353 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 AFMP43652 599 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 PLK1P53350 603 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 SULT2A1Q06520 285 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 C1QBPQ07021 282 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 FZD2Q14332 565 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 C4orf17Q53FE4 359 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 NEK5Q6P3R8 708 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 DSG4Q86SJ6 1040 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 C14orf80Q86SX3 495 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 HORMAD1Q86X24 394 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 GRAMD1CQ8IYS0 662 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 LGI2Q8N0V4 545 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 SIX6OS1Q8N1H7 587 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 TTC39CQ8N584 583 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 CCDC150Q8NCX0 1101 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 ZNF548Q8NEK5 533 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 FAXDC2Q96IV6 333 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC25A18Q9H1K4 315 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 MAN2B2Q9Y2E5 1009 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 FRMD4BQ9Y2L6 1034 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 PCDHGA7Q9Y5G6 932 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 HS3ST3A1Q9Y663 406 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 CSNK1G3Q9Y6M4 447 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 MED13Q9UHV7 2174 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 LRRK2Q5S007 2527 aa9.2□□□□□ -0.94
RABGGTA-217ENST00000560521 TEP1Q99973 2627 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 CREBBPQ92793 2442 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SPTY2D1-AS1A0A0U1RR47 76 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 POM121BA6NF01 834 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 C1QTNF3-AMACRE9PGA6 284 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 NTN3O00634 580 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 PLD2O14939 933 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 MUSKO15146 869 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SPTLC2O15270 562 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 ALOX15BO15296 676 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 AQP9O43315 295 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 ATP9BO43861 1147 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 PPP6R2O75170 966 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 PPFIA2O75334 1257 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 LTFP02788 710 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 CTSLP07711 333 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 NME1P15531 152 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 PDGFRAP16234 1089 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 ZNF18P17022 549 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 WT1P19544 449 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 TACR2P21452 398 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SYT1P21579 422 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 AKT2P31751 481 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 UGT1A5P35504 534 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 RGS7P49802 495 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 MCCD1P59942 119 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 CYP4F2P78329 520 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SERINC3Q13530 473 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SLC12A1Q13621 1099 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 CLCA4Q14CN2 919 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 STK38Q15208 465 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 DLG2Q15700 870 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 IGFBP7Q16270 282 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SKIDA1Q1XH10 827 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 ACCSLQ4AC99 568 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 TPRG1LQ5T0D9 272 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 RAP1GAP2Q684P5 730 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 SEL1L3Q68CR1 1132 aa9.19□□□□□ -0.94
RABGGTA-217ENST00000560521 KRT39Q6A163 491 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms