RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PRUNE1Q86TP1 453 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 RELL1Q8IUW5 271 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 ARID3BQ8IVW6 561 aaPredicted RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 BBS7Q8IWZ6 715 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 GSPT2Q8IYD1 628 aaKnown RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 ZNF567Q8N184 647 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 ZCCHC9Q8N567 271 aaKnown RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 CCDC33Q8N5R6 958 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 TDRD5Q8NAT2 981 aaKnown RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 MCUQ8NE86 351 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 ZSCAN18Q8TBC5 510 aaPredicted RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 CCDC110Q8TBZ0 833 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 DDI1Q8WTU0 396 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 MAML1Q92585 1016 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 PRCCQ92733 491 aaPredicted RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 ARHGEF2Q92974 986 aaKnown RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 E2F7Q96AV8 911 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 MYEOVQ96EZ4 313 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 RIPOR3Q96MK2 946 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 IL12RB2Q99665 862 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 ACBD3Q9H3P7 528 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 VIPAS39Q9H9C1 493 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 SP110Q9HB58 689 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 TRPV4Q9HBA0 871 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 EIF2B3Q9NR50 452 aaKnown RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 RAB6BQ9NRW1 208 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 OBP2AQ9NY56 170 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 GOLGA6AQ9NYA3 693 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 SEPT10Q9P0V9 454 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 KLHL8Q9P2G9 620 aaPredicted RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 HPCAL4Q9UM19 191 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 CCL26Q9Y258 94 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 TCF20Q9UGU0 1960 aaKnown RBP8.8□□□□□ -1
TRAF3-209ENST00000560463 ATG2BQ96BY7 2078 aa8.8□□□□□ -1
TRAF3-209ENST00000560463 E7EVH7 732 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 AP3B1O00203 1094 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 TRDMT1O14717 391 aaKnown RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 LINC01565O15544 149 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 KDELR3O43731 214 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 PRAMEF11O60813 436 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 NEBLO76041 1014 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 LUC7L3O95232 432 aaKnown RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 PRAMEF12O95522 483 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 JCHAINP01591 159 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 FAM153BP0C7A2 387 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 MTHFRP42898 656 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 TNNT3P45378 269 aaPredicted RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 SGSHP51688 502 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 PRPSAP1Q14558 356 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 RFTN1Q14699 578 aaPredicted RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 COL19A1Q14993 1142 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 CTC1Q2NKJ3 1217 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 FAM153CQ494X1 144 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 MARC1Q5VT66 337 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 SYCE2Q6PIF2 218 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 TRMT10CQ7L0Y3 403 aaKnown RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 MTERF4Q7Z6M4 381 aaKnown RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 CIR1Q86X95 450 aaPredicted RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 ZNF354CQ86Y25 554 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 PDIK1LQ8N165 341 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 BBS5Q8N3I7 341 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 CARNMT1Q8N4J0 409 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 TEX26Q8N6G2 289 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 NETO2Q8NC67 525 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 FIBINQ8TAL6 211 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 ITFG1Q8TB96 612 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 ING5Q8WYH8 240 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 SMARCD2Q92925 531 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 HMCESQ96FZ2 354 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 ZSWIM3Q96MP5 696 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 ASB16Q96NS5 453 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 FUT8Q9BYC5 575 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 ACE2Q9BYF1 805 aaPredicted RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 SLC2A11Q9BYW1 496 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 GBA3Q9H227 469 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 ETNK1Q9HBU6 452 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 FAM153AQ9UHL3 310 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 AAR2Q9Y312 384 aaKnown RBP8.79□□□□□ -1
TRAF3-209ENST00000560463 MTCH2Q9Y6C9 303 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 LRRK1Q38SD2 2015 aa8.79□□□□□ -1
TRAF3-209ENST00000560463 COL4A3Q01955 1670 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CKAP5Q14008 2032 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 COL4A2P08572 1712 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 PIKFYVEQ9Y2I7 2098 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 MAP2K7O14733 419 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 CACNG3O60359 315 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 ANXA9O76027 345 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 METTL18O95568 372 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 PEX11BO96011 259 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 APRTP07741 180 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 MLNP12872 115 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 CES1P23141 567 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 PSMB4P28070 264 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 HOXD9P28356 352 aaPredicted RBP8.78□□□□□ -1
TRAF3-209ENST00000560463 LMAN1P49257 510 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 PLK1P53350 603 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 PMS2P54278 862 aa8.78□□□□□ -1
TRAF3-209ENST00000560463 NRLP54845 237 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms