RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CYP3A7-CYP3A51PA0A087WV96 503 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 TPP1O14773 563 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 CLGNO14967 610 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 RNF224P0DH78 156 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 PECAM1P16284 738 aaPredicted RBP2.95□□□□□ -1.94
SPG11-222ENST00000560435 EGR1P18146 543 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 CYP3A7P24462 503 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 KLRC2P26717 231 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 PHEXP78562 749 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 ST3GAL1Q11201 340 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 MYBPHQ13203 477 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 PKP1Q13835 747 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 VWA5B1Q5TIE3 1220 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 GDPD4Q6W3E5 623 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 MON1BQ7L1V2 547 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 TRMT1LQ7Z2T5 733 aaKnown RBP2.95□□□□□ -1.94
SPG11-222ENST00000560435 TTC30AQ86WT1 665 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 ANKRD44Q8N8A2 993 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 ATP11CQ8NB49 1132 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 ZNF114Q8NC26 417 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 CEP76Q8TAP6 659 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 SECTM1Q8WVN6 248 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 SORCS1Q8WY21 1168 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 CD101Q93033 1021 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 SNX27Q96L92 541 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 GFM1Q96RP9 751 aaKnown RBP2.95□□□□□ -1.94
SPG11-222ENST00000560435 BRINP2Q9C0B6 783 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 EVA1AQ9H8M9 152 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 FSCN3Q9NQT6 498 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 CADPSQ9ULU8 1353 aa2.95□□□□□ -1.94
SPG11-222ENST00000560435 LOC105369274A0A096LPK9 316 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 LOC102723532A0A0G2JNH3 316 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 A0A0U1RQJ8 604 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 FAM172BPA6NC97 362 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 SRGAP2BP0DMP2 458 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 GABRB3P28472 473 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 PEX5P50542 639 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 EPHB1P54762 984 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 CDH12P55289 794 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 FOXL2P58012 376 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 ZBTB16Q05516 673 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 DLG1Q12959 904 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 PLK5Q496M5 336 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 ARHGAP29Q52LW3 1261 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 PLEKHO1Q53GL0 409 aaPredicted RBP2.94□□□□□ -1.94
SPG11-222ENST00000560435 ZNF772Q68DY9 489 aaPredicted RBP2.94□□□□□ -1.94
SPG11-222ENST00000560435 CHST15Q7LFX5 561 aaPredicted RBP2.94□□□□□ -1.94
SPG11-222ENST00000560435 KRTAP7-1Q8IUC3 87 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 OR4N4Q8N0Y3 316 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 TMEM217Q8N7C4 229 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 ANKRD9Q96BM1 317 aaPredicted RBP2.94□□□□□ -1.94
SPG11-222ENST00000560435 TRMT61BQ9BVS5 477 aaKnown RBP2.94□□□□□ -1.94
SPG11-222ENST00000560435 HIPK3Q9H422 1215 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 UBTD1Q9HAC8 227 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 ZBTB1Q9Y2K1 713 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 SLC45A1Q9Y2W3 748 aa2.94□□□□□ -1.94
SPG11-222ENST00000560435 J3KTA2 159 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 EYA2O00167 538 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 ITM2AO43736 263 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 TAF5LO75529 589 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 CYP3A4P08684 503 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 FGFR2P21802 821 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 MXI1P50539 228 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 ANKRD40Q6AI12 368 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 PPP4R4Q6NUP7 873 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 TUBA1AQ71U36 451 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 BEND5Q7L4P6 421 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 PHKBQ93100 1093 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 TXNDC15Q96J42 360 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 FEM1CQ96JP0 617 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 TUBA1CQ9BQE3 449 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 DDX20Q9UHI6 824 aaKnown RBP2.93□□□□□ -1.94
SPG11-222ENST00000560435 SNX13Q9Y5W8 968 aa2.93□□□□□ -1.94
SPG11-222ENST00000560435 IGKV3D-15A0A087WSY6 115 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 PNMA6EA0A0J9YXQ4 647 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.92□□□□□ -1.94
SPG11-222ENST00000560435 NPIPB11E5RHQ5 1161 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 M0QYT0 321 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 TMCC1O94876 653 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 AFPP02771 609 aaKnown RBP2.92□□□□□ -1.94
SPG11-222ENST00000560435 ENO3P13929 434 aaPredicted RBP2.92□□□□□ -1.94
SPG11-222ENST00000560435 CDKN1AP38936 164 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 RPL15P61313 204 aaKnown RBP2.92□□□□□ -1.94
SPG11-222ENST00000560435 RBM6P78332 1123 aaKnown RBP2.92□□□□□ -1.94
SPG11-222ENST00000560435 SEMA5AQ13591 1074 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 FAM102BQ5T8I3 360 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 UNQ6126/PRO20091Q6UXV3 157 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 ANKS1BQ7Z6G8 1248 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 RASGRP3Q8IV61 690 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 MAB21L3Q8N8X9 362 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 TEX45Q8NA69 505 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 FAM110DQ8TAY7 271 aaPredicted RBP2.92□□□□□ -1.94
SPG11-222ENST00000560435 NEK9Q8TD19 979 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 LRRC8CQ8TDW0 803 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 NUP62CLQ9H1M0 184 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 MYO1AQ9UBC5 1043 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 TCF19Q9Y242 345 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 NFS1Q9Y697 457 aa2.92□□□□□ -1.94
SPG11-222ENST00000560435 FAM72CH0Y354 149 aa2.91□□□□□ -1.94
SPG11-222ENST00000560435 P2RY10O00398 339 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms