RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 RWDD4Q6NW29 188 aaKnown RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 DCUN1D2Q6PH85 259 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 USP30Q70CQ3 517 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 CCDC185Q8N715 623 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 DCAF4L2Q8NA75 395 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 FRS2Q8WU20 508 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 FAM129BQ96TA1 746 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 PSMB7Q99436 277 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 EDEM3Q9BZQ6 932 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 ZDHHC5Q9C0B5 715 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 TTYH3Q9C0H2 523 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 SGK2Q9HBY8 427 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 AIPL1Q9NZN9 384 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 PPARGC1AQ9UBK2 798 aaKnown RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 OR12D3Q9UGF7 316 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 SERGEFQ9UGK8 458 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 VPS51Q9UID3 782 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
LRRC28-214ENST00000559433 PLXNA2O75051 1894 aa12.91□□□□□ -0.34
LRRC28-214ENST00000559433 A0A0D9SEW6 157 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 FAM47DPA6NHR8 397 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 BNIP3LO60238 219 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 SNAP91O60641 907 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 RNASEH2AO75792 299 aaKnown RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 FSBPO95073 299 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 PLEKP08567 350 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ADRB1P08588 477 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 DESP17661 470 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 PRKCIP41743 596 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ZNF143P52747 638 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 RPL7AP62424 266 aaKnown RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 NRG1Q02297 640 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 TEAD4Q15561 434 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 DLG2Q15700 870 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 FIGNQ5HY92 759 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ZNF783Q6ZMS7 281 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 Q6ZVU0 165 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 DSG4Q86SJ6 1040 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 DRC7Q8IY82 874 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 OR7D4Q8NG98 312 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 OR8D1Q8WZ84 308 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 OSBPL2Q9H1P3 480 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ATP13A1Q9HD20 1204 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 FZD4Q9ULV1 537 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 HS3ST2Q9Y278 367 aa12.9□□□□□ -0.34
LRRC28-214ENST00000559433 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-214ENST00000559433 TMEM131Q92545 1883 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 ILVBLA1L0T0 632 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 LRRC72A6NJI9 287 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 FAM72CH0Y354 149 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 CBX4O00257 560 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-214ENST00000559433 MT-CO1P00395 513 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 SKILP12757 684 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 SRCP12931 536 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 CEACAM1P13688 526 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 CSRP1P21291 193 aaKnown RBP12.89□□□□□ -0.35
LRRC28-214ENST00000559433 C5AR1P21730 350 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 GLDCP23378 1020 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 GNA12Q03113 381 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 SCAPQ12770 1279 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 EFHC2Q5JST6 749 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 FAM72AQ5TYM5 149 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 MANEALQ5VSG8 457 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 FAM72DQ6L9T8 149 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 SCYL2Q6P3W7 929 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 IL27RAQ6UWB1 636 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 LINGO4Q6UY18 593 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 FAM72BQ86X60 149 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 DNAAF5Q86Y56 855 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 AADATQ8N5Z0 425 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 NTAN1Q96AB6 310 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D31Q96DN5 1066 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 CNPY3Q9BT09 278 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 SPON2Q9BUD6 331 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 ADAMTS1Q9UHI8 967 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 PCDHB9Q9Y5E1 797 aa12.89□□□□□ -0.35
LRRC28-214ENST00000559433 A0A1W2PQJ5 194 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 C1QTNF3-AMACRE9PGA6 284 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 K7ERQ8 282 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 DDX3XO00571 662 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRRC28-214ENST00000559433 ALOX15BO15296 676 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 LRIG2O94898 1065 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms