RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DNAI1Q9UI46 699 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 SCML1Q9UN30 329 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 TBC1D30Q9Y2I9 924 aa8.4□□□□□ -1.06
SNX1-207ENST00000559401 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
SNX1-207ENST00000559401 FRYLO94915 3013 aa8.4□□□□□ -1.07
SNX1-207ENST00000559401 TP53BP1Q12888 1972 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 PLXNA2O75051 1894 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 IGLV3-10A0A075B6K4 115 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 A0A0D9SEW6 157 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 A0A1B0GTW7 788 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 ILVBLA1L0T0 632 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 LRRC72A6NJI9 287 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 METTL12A8MUP2 240 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 C1QTNF3-AMACRE9PGA6 284 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FAM72CH0Y354 149 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 K7ERQ8 282 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 BCAT2O15382 392 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 CREB3O43889 395 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 LRIG2O94898 1065 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FTLP02792 175 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 SYPP08247 313 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 PLEKP08567 350 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 SRCP12931 536 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 C5AR1P21730 350 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 GLDCP23378 1020 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 ETFBP38117 255 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 PRKCIP41743 596 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 RECQLP46063 649 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 DNA2P51530 1060 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 GNA12Q03113 381 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 POM121L1PQ3SYA9 428 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FIGNQ5HY92 759 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FAM72AQ5TYM5 149 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FAM46CQ5VWP2 391 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FAM72DQ6L9T8 149 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 C22orf39Q6P5X5 142 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 USP30Q70CQ3 517 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 TMC6Q7Z403 805 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 ADAT2Q7Z6V5 191 aaKnown RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 FAM72BQ86X60 149 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 MINDY1Q8N5J2 469 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 OR2I1PQ8NGU4 316 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FRS2Q8WU20 508 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 CENPIQ92674 756 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 NTAN1Q96AB6 310 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 ALG14Q96F25 216 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 TRIM11Q96F44 468 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 VCPIP1Q96JH7 1222 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 FAM129BQ96TA1 746 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 PSMB7Q99436 277 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 SYT11Q9BT88 431 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 MAGEB5Q9BZ81 275 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 TTYH3Q9C0H2 523 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 OSBPL2Q9H1P3 480 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 PCED1AQ9H1Q7 454 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 MYO1AQ9UBC5 1043 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 PPARGC1AQ9UBK2 798 aaKnown RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 CNOT8Q9UFF9 292 aaKnown RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 SERGEFQ9UGK8 458 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.39□□□□□ -1.07
SNX1-207ENST00000559401 OR51B4Q9Y5P0 310 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 SCINQ9Y6U3 715 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 PCDH15Q96QU1 1955 aa8.39□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3DA0A087WVF3 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3IA0A087WXS9 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3EA0A087X179 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3KA0A087X1G2 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TCRBV5S1A1TA0A578 114 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3FA6NER0 549 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3LB9A6J9 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 PLK4O00444 970 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 KPNA3O00505 521 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 DDX3XO00571 662 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNX1-207ENST00000559401 ARHGAP33O14559 1287 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 CBFA2T2O43439 604 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 ATP9BO43861 1147 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 OPHN1O60890 802 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 RAMP2O60895 175 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 RTN2O75298 545 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 RNF8O76064 485 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 MT-CO1P00395 513 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3HP0C7X1 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 RHOQP17081 205 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 EPHB2P29323 1055 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 ACVRL1P37023 503 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 MAPKAPK2P49137 400 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 NOVA1P51513 510 aaKnown RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 ZBED6P86452 979 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 NRG1Q02297 640 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 GRIK2Q13002 908 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 MAMLD1Q13495 774 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TEAD4Q15561 434 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 PPP1R15BQ5SWA1 713 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 KIAA0895LQ68EN5 471 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms