RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ILVBLA1L0T0 632 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 TMCO5BA8MYB1 307 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 FAM72CH0Y354 149 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 GOLGA6L19H0YKK7 550 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 TNFAIP3P21580 790 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 GLDCP23378 1020 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 MAOBP27338 520 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 MAPK8P45983 427 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 METAP1P53582 386 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 UBASH3AP57075 661 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 KRT83P78385 493 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 OGDHQ02218 1023 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 KLHL30Q0D2K2 578 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 SPEGQ15772 3267 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 PPM1JQ5JR12 505 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 FAM72AQ5TYM5 149 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 FAM72DQ6L9T8 149 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 ZNF783Q6ZMS7 281 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 NLRP14Q86W24 1093 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 FAM72BQ86X60 149 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 AADATQ8N5Z0 425 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 OR7D4Q8NG98 312 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 TBC1D31Q96DN5 1066 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 DOCK9Q9BZ29 2069 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 MAGEB5Q9BZ81 275 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 OSBPL2Q9H1P3 480 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 FBXL12Q9NXK8 326 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 ADAMTS1Q9UHI8 967 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 EIF2B4Q9UI10 523 aaKnown RBP11.22□□□□□ -0.61
SPG11-216ENST00000559347 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.22□□□□□ -0.61
SPG11-216ENST00000559347 SLCO1B1Q9Y6L6 691 aa11.22□□□□□ -0.61
SPG11-216ENST00000559347 ANKRD36A6QL64 1941 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 A0A1B0GTW7 788 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 A0A1W2PP55 124 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 C10orf142B7Z368 130 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 DDX3XO00571 662 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPG11-216ENST00000559347 ARHGAP33O14559 1287 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 ALOX15BO15296 676 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 RNASEH2AO75792 299 aaKnown RBP11.21□□□□□ -0.61
SPG11-216ENST00000559347 LRIG2O94898 1065 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 MT-CO1P00395 513 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 IL1BP01584 269 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 GYPCP04921 128 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 GZMAP12544 262 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 GNSP15586 552 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 RHOQP17081 205 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 C5AR1P21730 350 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 SLC8A1P32418 973 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 DRD3P35462 400 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 MAPKAPK2P49137 400 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 GNA12Q03113 381 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 GFPT1Q06210 699 aaPredicted RBP11.21□□□□□ -0.61
SPG11-216ENST00000559347 ZNF252P-AS1Q0IIN9 211 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 MAMLD1Q13495 774 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 DLG2Q15700 870 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 ACCSLQ4AC99 568 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 TDRD12Q587J7 1177 aaKnown RBP11.21□□□□□ -0.61
SPG11-216ENST00000559347 DAB2IPQ5VWQ8 1189 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 HGSNATQ68CP4 663 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 PLEKHA7Q6IQ23 1121 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 C22orf39Q6P5X5 142 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 DCUN1D2Q6PH85 259 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 TMC6Q7Z403 805 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 SLFN11Q7Z7L1 901 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 DNAAF5Q86Y56 855 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 DRC7Q8IY82 874 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 PYROXD2Q8N2H3 581 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 MINDY1Q8N5J2 469 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 C1orf216Q8TAB5 229 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 SNX19Q92543 992 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 FAM131CQ96AQ9 280 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 BIRC7Q96CA5 298 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 MIR1-1HGQ9H1L0 117 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 NDFIP2Q9NV92 336 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 TMEM248Q9NWD8 314 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 IFNKQ9P0W0 207 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 NCKAP1Q9Y2A7 1128 aa11.21□□□□□ -0.61
SPG11-216ENST00000559347 WDFY3Q8IZQ1 3526 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 K7ERQ8 282 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 CBX4O00257 560 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 MCF2LO15068 1137 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ZMPSTE24O75844 475 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 IGHV4-34P06331 123 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 PLEKP08567 350 aaPredicted RBP11.2□□□□□ -0.62
SPG11-216ENST00000559347 SKILP12757 684 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 CLCN6P51797 869 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ADPRHP54922 357 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 AIF1P55008 147 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 ARF5P84085 180 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 SFSWAPQ12872 951 aaKnown RBP11.2□□□□□ -0.62
SPG11-216ENST00000559347 GRIK2Q13002 908 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 SEMA3BQ13214 749 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 KIAA0895LQ68EN5 471 aa11.2□□□□□ -0.62
SPG11-216ENST00000559347 RWDD4Q6NW29 188 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms