RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 RHOBTB3O94955 611 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 KAT7O95251 611 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TBX18O95935 607 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 MYL1P05976 194 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 HMBSP08397 361 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 FAM163BP0C2L3 166 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 EPB41P11171 864 aaKnown RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 RPL13P26373 211 aaKnown RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 HOXA6P31267 233 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 PSMC2P35998 433 aaKnown RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 DHPSP49366 369 aaPredicted RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 LAPTM5Q13571 262 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 PLK5Q496M5 336 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 C10orf76Q5T2E6 689 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 IL31Q6EBC2 164 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 ISM2Q6H9L7 571 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 GALNT18Q6P9A2 607 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 RHBDF2Q6PJF5 856 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 INTS8Q75QN2 995 aaKnown RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 SYT13Q7L8C5 426 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 MIB1Q86YT6 1006 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TXNDC5Q8NBS9 432 aaKnown RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 CYB5D2Q8WUJ1 264 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TAF4BQ92750 862 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 CYFIP2Q96F07 1278 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 CCDC34Q96HJ3 373 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 RTKNQ9BST9 563 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 VPS11Q9H270 941 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 FBXO44Q9H4M3 255 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TLR8Q9NR97 1041 aaKnown RBP7.71□□□□□ -1.18
SPG11-213ENST00000558988 RXFP3Q9NSD7 469 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TBC1D14Q9P2M4 693 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 ST6GALNAC2Q9UJ37 374 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 TRAF3IP3Q9Y228 551 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 HS3ST3A1Q9Y663 406 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 SPTBN2O15020 2390 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 EML5Q05BV3 1969 aa7.71□□□□□ -1.18
SPG11-213ENST00000558988 A0A1W2PQ27 194 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 A0A1W2PQ64 194 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 A0A1W2PQD8 194 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 A0A1W2PQH9 124 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 TCRBV21S2A2A0A5A6 115 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 E2F8A0AVK6 867 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 SGK1O00141 431 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 SLC30A4O14863 429 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 IKBKBO14920 756 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 TRIM24O15164 1050 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 LRP3O75074 770 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 EPN2O95208 641 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 OLFM2O95897 454 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 TCF3P15923 654 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 BCKDHBP21953 392 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 ATP5C1P36542 298 aaKnown RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 MXI1P50539 228 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 GAD2Q05329 585 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 GOLGA8FQ08AF8 430 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 GOLGA8DPQ0D2H9 430 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 LRMPQ12912 555 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 CDSNQ15517 529 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 CRY1Q16526 586 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 PLEKHN1Q494U1 663 aaPredicted RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 USP39Q53GS9 565 aaKnown RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 CLEC20AQ6ZU45 233 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 RSRC2Q7L4I2 434 aaKnown RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 UNC93AQ86WB7 457 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 TMEM25Q86YD3 366 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 CARFQ8N187 725 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 GUF1Q8N442 669 aaKnown RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 CAMKK1Q8N5S9 505 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 DEFB119Q8N690 84 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 ZNF513Q8N8E2 541 aaPredicted RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 MDGA1Q8NFP4 955 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 CCDC26Q8TAB7 109 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 OVCA2Q8WZ82 227 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 SEMA4DQ92854 862 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 TSG101Q99816 390 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 BBS2Q9BXC9 721 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 TMEM8AQ9HCN3 771 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 SPHK2Q9NRA0 654 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 DNAJC17Q9NVM6 304 aaKnown RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 PLK2Q9NYY3 685 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 RASAL2Q9UJF2 1139 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 MMP17Q9ULZ9 603 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 KIAA1549LQ6ZVL6 1849 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 ATXN2Q99700 1313 aaKnown RBP7.7□□□□□ -1.18
SPG11-213ENST00000558988 CFAP54Q96N23 3096 aa7.7□□□□□ -1.18
SPG11-213ENST00000558988 ABCA7Q8IZY2 2146 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 CCDC163A0A0D9SF12 145 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 TRIM49BA6NDI0 452 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.69□□□□□ -1.18
SPG11-213ENST00000558988 CETN3O15182 167 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 TULP3O75386 442 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 ALDH1A2O94788 518 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 RHOBTB1O94844 696 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 PLATP00750 562 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 RARGP13631 454 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 HNRNPLP14866 589 aaKnown RBP eCLIP7.69□□□□□ -1.182e-6■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms