RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 GPR27Q9NS67 375 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 PPP4R2Q9NY27 417 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 PNMA8BQ9ULN7 279 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-206ENST00000558739 ZFR2Q9UPR6 939 aaKnown RBP12.25□□□□□ -0.45
SMAD3-206ENST00000558739 HBS1LQ9Y450 684 aaKnown RBP12.25□□□□□ -0.45
SMAD3-206ENST00000558739 LOXL2Q9Y4K0 774 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 RAD51BO15315 384 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
SMAD3-206ENST00000558739 SLC7A4O43246 635 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 AQP9O43315 295 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 STX6O43752 255 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 C4BPAP04003 597 aaKnown RBP12.24□□□□□ -0.45
SMAD3-206ENST00000558739 CSF2P04141 144 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 SRPRAP08240 638 aaKnown RBP12.24□□□□□ -0.45
SMAD3-206ENST00000558739 NR1D1P20393 614 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 TKTL1P51854 596 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 INCA1Q0VD86 236 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 MPP7Q5T2T1 576 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 EPM2AIP1Q7L775 607 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-206ENST00000558739 XXYLT1Q8NBI6 393 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 TPCN2Q8NHX9 752 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 PMEPA1Q969W9 287 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 BMFQ96LC9 184 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 SPAG5Q96R06 1193 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 NUCKS1Q9H1E3 243 aaKnown RBP12.24□□□□□ -0.45
SMAD3-206ENST00000558739 DAAM1Q9Y4D1 1078 aa12.24□□□□□ -0.45
SMAD3-206ENST00000558739 A0A1W2PQM1 296 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 YJEFN3A6XGL0 299 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 C9orf172C9J069 976 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 E7ENQ6 273 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 CD2BP2O95400 341 aaKnown RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 ASS1P00966 412 aaKnown RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 CELA2BP08218 269 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 SLFN14P0C7P3 912 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 JMJD7P0C870 316 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 HNRNPA2B1P22626 353 aaKnown RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 GNLYP22749 145 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 AKT2P31751 481 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 C1orf61Q13536 156 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 FGL2Q14314 439 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 TCEA2Q15560 299 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 RRAGBQ5VZM2 374 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 Q6ZVU0 165 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 HORMAD1Q86X24 394 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 ARHGAP18Q8N392 663 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 HJURPQ8NCD3 748 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 C9orf43Q8TAL5 461 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 PANK2Q9BZ23 570 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 APOBEC3GQ9HC16 384 aaKnown RBP12.23□□□□□ -0.45
SMAD3-206ENST00000558739 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 PPM1HQ9ULR3 514 aa12.23□□□□□ -0.45
SMAD3-206ENST00000558739 ANKHD1Q8IWZ3 2542 aaKnown RBP12.22□□□□□ -0.45
SMAD3-206ENST00000558739 SPTY2D1-AS1A0A0U1RR47 76 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 A6NNZ2 444 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 LATS1O95835 1130 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 ZBED1O96006 694 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 IGLV3-27P01718 113 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 CTSLP07711 333 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 JUNDP17535 347 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 ELAVL4P26378 380 aaKnown RBP12.22□□□□□ -0.45
SMAD3-206ENST00000558739 CCL7P80098 99 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 EIF2B5Q13144 721 aaKnown RBP12.22□□□□□ -0.45
SMAD3-206ENST00000558739 RNF219Q5W0B1 726 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-206ENST00000558739 TMPRSS9Q7Z410 1059 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 PARGQ86W56 976 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 CIR1Q86X95 450 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-206ENST00000558739 TICAM1Q8IUC6 712 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 SDR16C5Q8N3Y7 309 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 KYQ8NBH2 561 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 PARD3BQ8TEW8 1205 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 USP7Q93009 1102 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 CCDC74AQ96AQ1 378 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 IFT43Q96FT9 208 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 IL12RB2Q99665 862 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 NCKIPSDQ9NZQ3 722 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 XPO7Q9UIA9 1087 aaKnown RBP12.22□□□□□ -0.45
SMAD3-206ENST00000558739 SALL4Q9UJQ4 1053 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 TUBD1Q9UJT1 453 aa12.22□□□□□ -0.45
SMAD3-206ENST00000558739 K7EM74 188 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 BNIP3LO60238 219 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 ACSL4O60488 711 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
SMAD3-206ENST00000558739 RPLP0P05388 317 aaKnown RBP12.21□□□□□ -0.45
SMAD3-206ENST00000558739 P4HA1P13674 534 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 ARSDP51689 593 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 MAPK10P53779 464 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 CLDN10P78369 228 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 ADIGQ0VDE8 80 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 EIF3IQ13347 325 aaKnown RBP12.21□□□□□ -0.45
SMAD3-206ENST00000558739 KMT5BQ4FZB7 885 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 DCAF6Q58WW2 860 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.45
SMAD3-206ENST00000558739 CAPRIN2Q6IMN6 1127 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms