RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 RPL10AP62906 217 aaKnown RBP6.43□□□□□ -1.38
ZEB1-211ENST00000558440 BYSLQ13895 437 aaKnown RBP6.43□□□□□ -1.38
ZEB1-211ENST00000558440 KCNB1Q14721 858 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 ZNF77Q15935 545 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 CRY1Q16526 586 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 SDHAF4Q5VUM1 108 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 LYSMD4Q5XG99 296 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 WSCD1Q658N2 575 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 KCNK18Q7Z418 384 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 LRRTM3Q86VH5 581 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 SYT12Q8IV01 421 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 EFCAB13Q8IY85 973 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 CCDC33Q8N5R6 958 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 SYT2Q8N9I0 419 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-211ENST00000558440 FSIP1Q8NA03 581 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 FAM184AQ8NB25 1140 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 STKLD1Q8NE28 680 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 MDGA1Q8NFP4 955 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 SGSM3Q96HU1 749 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 ZNF560Q96MR9 790 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 GTPBP2Q9BX10 602 aaKnown RBP6.43□□□□□ -1.38
ZEB1-211ENST00000558440 ASB7Q9H672 318 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 GPR27Q9NS67 375 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 DPP3Q9NY33 737 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 CPSF3Q9UKF6 684 aaKnown RBP6.43□□□□□ -1.38
ZEB1-211ENST00000558440 C2CD2Q9Y426 696 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 TP53BP1Q12888 1972 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-211ENST00000558440 NAV2Q8IVL1 2488 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 CFAP46Q8IYW2 2715 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 TENM4Q6N022 2769 aa6.43□□□□□ -1.38
ZEB1-211ENST00000558440 A0A0B4J269 797 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MROH6A6NGR9 719 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MYMKA6NI61 221 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 KPNA7A9QM74 516 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 K7EQS6 105 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 DDX3XO00571 662 aaKnown RBP eCLIP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 KLF4O43474 513 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 DLX3O60479 287 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 OPHN1O60890 802 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 NOL4O94818 638 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PIGRP01833 764 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ITGB3P05106 788 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PLA2G4BP0C869 781 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ZNF28P17035 718 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 HDCP19113 662 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ABCD1P33897 745 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PRPHP41219 470 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 P2RY2P41231 377 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PNPLA4P41247 253 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PTGER3P43115 390 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 NEK4P51957 841 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 SLC12A3P55017 1021 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MRPS21P82921 87 aaKnown RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MYL7Q01449 175 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 GFPT1Q06210 699 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 SEMA3BQ13214 749 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 HNRNPDQ14103 355 aaKnown RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 SPDYCQ5MJ68 293 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ADALQ6DHV7 355 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 TEPPQ6URK8 271 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 RABEPKQ7Z6M1 372 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PIP4P1Q86T03 277 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PROSER1Q86XN7 944 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 CCDC83Q8IWF9 413 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MYCT1Q8N699 235 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ARL14EPQ8N8R7 260 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 TXNDC5Q8NBS9 432 aaKnown RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 FBXO18Q8NFZ0 1043 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 OLIG1Q8TAK6 271 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 CEP76Q8TAP6 659 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PHOSPHO1Q8TCT1 267 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 SH3RF2Q8TEC5 729 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 LEO1Q8WVC0 666 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 HMGB4Q8WW32 186 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 RLN3Q8WXF3 142 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 SLC22A12Q96S37 553 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 CYP2S1Q96SQ9 504 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PLIN2Q99541 437 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MMTAG2Q9BU76 263 aaKnown RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 CCSER1Q9C0I3 900 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 TMLHEQ9NVH6 421 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 MYOTQ9UBF9 498 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ODF2LQ9ULJ1 636 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 PCDHB6Q9Y5E3 794 aa6.42□□□□□ -1.38
ZEB1-211ENST00000558440 ATXN2Q99700 1313 aaKnown RBP6.42□□□□□ -1.38
ZEB1-211ENST00000558440 TMEM131Q92545 1883 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 FAM221BA6H8Z2 402 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 C2orf78A6NCI8 922 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 EIF4E1BA6NMX2 242 aaKnown RBP6.41□□□□□ -1.38
ZEB1-211ENST00000558440 AP5Z1O43299 807 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 HUS1O60921 280 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 TBCAO75347 108 aaKnown RBP6.41□□□□□ -1.38
ZEB1-211ENST00000558440 KLF8O95600 359 aaPredicted RBP6.41□□□□□ -1.38
ZEB1-211ENST00000558440 PLATP00750 562 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 APODP05090 189 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 KRT18P05783 430 aaKnown RBP6.41□□□□□ -1.38
ZEB1-211ENST00000558440 CYP2F1P24903 491 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 HOXD12P35452 270 aa6.41□□□□□ -1.38
ZEB1-211ENST00000558440 OPRD1P41143 372 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms