RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FSTL4Q6MZW2 842 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 ATG14Q6ZNE5 492 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 NUP93Q8N1F7 819 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 SH3TC2Q8TF17 1288 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 GIPC2Q8TF65 315 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 DPF3Q92784 378 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 SLC7A6OSQ96CW6 309 aaPredicted RBP10.76□□□□□ -0.69
TPM1-210ENST00000558264 LBHD1Q9BQE6 289 aaPredicted RBP10.76□□□□□ -0.69
TPM1-210ENST00000558264 RBM22Q9NW64 420 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM1-210ENST00000558264 SIRPGQ9P1W8 387 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 TRHDEQ9UKU6 1024 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 TET1Q8NFU7 2136 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 CAPN15O75808 1086 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 CABYRO75952 493 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 NEBLO76041 1014 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 EOMESO95936 686 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 PRKCGP05129 697 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 AQP5P55064 265 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 GPNMBQ14956 572 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 ALFQ53S48 1182 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 TEDDM1Q5T9Z0 273 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 TAS1R1Q7RTX1 841 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 TMEM135Q86UB9 458 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 C10orf107Q8IVU9 208 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 SLC25A41Q8N5S1 370 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 SCLYQ96I15 445 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 EBF4Q9BQW3 602 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 NMUR2Q9GZQ4 415 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 BRD8Q9H0E9 1235 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 SLC2A6Q9UGQ3 507 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 J3KR12 359 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 KIF3CO14782 793 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 MTSS1O43312 755 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PLIN3O60664 434 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 DNAJC6O75061 913 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 GJB3O75712 270 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 HAUS5O94927 633 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 OAZ2O95190 189 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 TBX4P57082 545 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 HTRA3P83110 453 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 OCRLQ01968 901 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 ITKQ08881 620 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 STX3Q13277 289 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 SEPT6Q14141 434 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PRPSAP1Q14558 356 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 DEFB115Q30KQ5 88 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 BRMS1LQ5PSV4 323 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 MANEALQ5VSG8 457 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 RAP1GAP2Q684P5 730 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PRSS55Q6UWB4 352 aaPredicted RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 TIFABQ6ZNK6 161 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 CCNJLQ8IV13 435 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 DCP1BQ8IZD4 617 aaKnown RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 AGR3Q8TD06 166 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 FBXO32Q969P5 355 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 MYEOVQ96EZ4 313 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 HAPLN3Q96S86 360 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 RBBP8Q99708 897 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 NAT9Q9BTE0 207 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 CPSF2Q9P2I0 782 aaKnown RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 ADAM28Q9UKQ2 775 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 SLC39A10Q9ULF5 831 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PCDHB5Q9Y5E4 795 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 MOXD2PA6NHM9 499 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PHGDHO43175 533 aaKnown RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 USP1O94782 785 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 HAPLN1P10915 354 aaPredicted RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 RPL17P18621 184 aaKnown RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 ARRB2P32121 409 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 ETFBP38117 255 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 SLC11A1P49279 550 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 CDH17Q12864 832 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 TAF10Q12962 218 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 MPP3Q13368 585 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 ZNF460Q14592 562 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 PCLAFQ15004 111 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 RTP2Q5QGT7 225 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 ATG16L1Q676U5 607 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 RNF19BQ6ZMZ0 732 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 DENND6AQ8IWF6 608 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 SPATA6LQ8N4H0 392 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 SERPINB11Q96P15 392 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 CPNE1Q99829 537 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 TBL1YQ9BQ87 522 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 TBC1D10AQ9BXI6 508 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 FTHL17Q9BXU8 183 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 OXCT2Q9BYC2 517 aaPredicted RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 NOL6Q9H6R4 1146 aaKnown RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 CATSPERBQ9H7T0 1116 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 GLOD4Q9HC38 313 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 HMX1Q9NP08 348 aaPredicted RBP10.75□□□□□ -0.69
TPM1-210ENST00000558264 FRMPD3Q5JV73 1810 aa10.75□□□□□ -0.69
TPM1-210ENST00000558264 KCNU1A8MYU2 1149 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 FCHO1O14526 889 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 ENPP3O14638 875 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 GLRA3O75311 464 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 UPP2O95045 317 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms