RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 KCNG4Q8TDN1 519 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 RUBCNQ92622 972 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 NELL1Q92832 810 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ARL8AQ96BM9 186 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 ZNF512Q96ME7 567 aaPredicted RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 PPP1R10Q96QC0 940 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 POLR3CQ9BUI4 534 aaPredicted RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 C2orf40Q9H1Z8 148 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 TMEM60Q9H2L4 133 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 LTB4R2Q9NPC1 389 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 C14orf119Q9NWQ9 140 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 HCFC1R1Q9NWW0 138 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 DLL3Q9NYJ7 618 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 DNMT3BQ9UBC3 853 aaKnown RBP6.57□□□□□ -1.36
CLPX-202ENST00000558103 FBXO4Q9UKT5 387 aa6.57□□□□□ -1.36
CLPX-202ENST00000558103 GPR179Q6PRD1 2367 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 HOXA3O43365 443 aaPredicted RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 KINO60870 393 aaKnown RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 MFAP3LO75121 409 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 PDGFRBP09619 1106 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 MTHFD2P13995 350 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 FCARP24071 287 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 ACRV1P26436 265 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 RPA1P27694 616 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 TKTP29401 623 aaKnown RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 OR1D2P34982 312 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 CASRP41180 1078 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 MAGEA9P43362 315 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 GPR3P46089 330 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 CLCNKBP51801 687 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 WNT3AP56704 352 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 MEF2AQ02078 507 aaPredicted RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 ANKRD1Q15327 319 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 MAPK6Q16659 721 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 UPP1Q16831 310 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 SLC5A9Q2M3M2 681 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 DCAF4L1Q3SXM0 396 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 GLRA4Q5JXX5 417 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 RTL10Q7L3V2 364 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 MAEAQ7L5Y9 396 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 DCLK2Q8N568 766 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 NECAB1Q8N987 351 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 ZBTB44Q8NCP5 570 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 COG1Q8WTW3 980 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 SNX33Q8WV41 574 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 KXD1Q9BQD3 176 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 ADPGKQ9BRR6 497 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 AURKAIP1Q9NWT8 199 aaPredicted RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 MTF2Q9Y483 593 aaPredicted RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 CDY1Q9Y6F8 540 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 ZNF638Q14966 1978 aaKnown RBP6.56□□□□□ -1.36
CLPX-202ENST00000558103 F5P12259 2224 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 SPAG17Q6Q759 2223 aa6.56□□□□□ -1.36
CLPX-202ENST00000558103 PHLPP2Q6ZVD8 1323 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ASPMQ8IZT6 3477 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 CFAP47Q6ZTR5 3102 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ARHGEF37A1IGU5 675 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 WDR27A2RRH5 827 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 K7ESF4 209 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 OVOL3O00110 214 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 JAK2O60674 1132 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ECI2O75521 394 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 B3GAT3O94766 335 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ABLIM3O94929 683 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 CYP11B2P19099 503 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 CD72P21854 359 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 MUTP22033 750 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 MCM7P33993 719 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 RPS9P46781 194 aaKnown RBP6.55□□□□□ -1.36
CLPX-202ENST00000558103 CDK17Q00537 523 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ROR1Q01973 937 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ORC2Q13416 577 aaPredicted RBP6.55□□□□□ -1.36
CLPX-202ENST00000558103 FOXE3Q13461 319 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 UBXN2BQ14CS0 331 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 PLEKHG6Q3KR16 790 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 NRN1LQ496H8 165 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 PABPC1LQ4VXU2 614 aaKnown RBP6.55□□□□□ -1.36
CLPX-202ENST00000558103 SLC44A4Q53GD3 710 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 XKR4Q5GH76 650 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 SLC8B1Q6J4K2 584 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 ALKAL1Q6UXT8 129 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 DGLUCYQ7Z3D6 616 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 KCNK18Q7Z418 384 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 DEPTORQ8TB45 409 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 DNASE1L2Q92874 299 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 CLDN23Q96B33 292 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 UROC1Q96N76 676 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 KIFC3Q9BVG8 833 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 PLA2G2FQ9BZM2 168 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 EPC1Q9H2F5 836 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 PRMT8Q9NR22 394 aaPredicted RBP6.55□□□□□ -1.36
CLPX-202ENST00000558103 GDE1Q9NZC3 331 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 G3BP2Q9UN86 482 aaKnown RBP6.55□□□□□ -1.36
CLPX-202ENST00000558103 TNFSF13BQ9Y275 285 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 GDAQ9Y2T3 454 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 PCDHGA2Q9Y5H1 932 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 NCOR2Q9Y618 2525 aa6.55□□□□□ -1.36
CLPX-202ENST00000558103 SCN1AP35498 2009 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms