RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CCDC42Q96M95 316 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 NUP85Q9BW27 656 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 MKRN2Q9H000 416 aaKnown RBP12.81□□□□□ -0.36
SLIRP-211ENST00000557623 CATSPERBQ9H7T0 1116 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 NHEJ1Q9H9Q4 299 aaPredicted RBP12.81□□□□□ -0.36
SLIRP-211ENST00000557623 ITM2CQ9NQX7 267 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 USP36Q9P275 1121 aaKnown RBP12.81□□□□□ -0.36
SLIRP-211ENST00000557623 ZNF212Q9UDV6 495 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
SLIRP-211ENST00000557623 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 TTC34A8MYJ7 566 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 FAM72CH0Y354 149 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 MYO1FO00160 1098 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 FGF10O15520 208 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-211ENST00000557623 ATP9BO43861 1147 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 CREB3O43889 395 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 SIN3BO75182 1162 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 NDUFS2O75306 463 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 DNTTP04053 509 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 BCKDHBP21953 392 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 EPHB2P29323 1055 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 MIPP30301 263 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 PCK1P35558 622 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 DPP6P42658 865 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 ZNF135P52742 658 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-211ENST00000557623 GNA12Q03113 381 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 FAM72AQ5TYM5 149 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 ZNF776Q68DI1 518 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-211ENST00000557623 FAM72DQ6L9T8 149 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 NLRP14Q86W24 1093 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 FAM72BQ86X60 149 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 NIPA2Q8N8Q9 360 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 PSMB7Q99436 277 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 CHP1Q99653 195 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 TRIM7Q9C029 511 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 SLC6A17Q9H1V8 727 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 RSPH9Q9H1X1 276 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-211ENST00000557623 MAGEH1Q9H213 219 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 ATP13A1Q9HD20 1204 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 UVRAGQ9P2Y5 699 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 PCSK1NQ9UHG2 260 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 SLCO3A1Q9UIG8 710 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 MBD1Q9UIS9 605 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-211ENST00000557623 ANAPC7Q9UJX3 599 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 SCML1Q9UN30 329 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 CYP8B1Q9UNU6 501 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 AP4E1Q9UPM8 1137 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
SLIRP-211ENST00000557623 A0A0D9SEW6 157 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 CXorf51AA0A1B0GTR3 108 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 WASH4PA8MWX3 477 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 FOXD2O60548 495 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 RAMP2O60895 175 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 LRCH4O75427 683 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 TMEM253P0C7T8 217 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 CD6P30203 668 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 STK19P49842 368 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 TPMTP51580 245 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 TPI1P60174 286 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 RPS14P62263 151 aaKnown RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 RPL6Q02878 288 aaKnown RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 TTC31Q49AM3 519 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 ACCSLQ4AC99 568 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 IL31Q6EBC2 164 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 DCLK2Q8N568 766 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 SH2D3CQ8N5H7 860 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 ARFGAP1Q8N6T3 406 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 RTL3Q8N8U3 475 aaKnown RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 OR7D4Q8NG98 312 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 ZNF564Q8TBZ8 553 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 PTPRN2Q92932 1015 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 ARHGEF26Q96DR7 871 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 CCDC114Q96M63 670 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 SPON2Q9BUD6 331 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 SNRNP25Q9BV90 132 aaKnown RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 MAGEB5Q9BZ81 275 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 ARRDC1-AS1Q9H2J1 176 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 DHX35Q9H5Z1 703 aaKnown RBP12.79□□□□□ -0.36
SLIRP-211ENST00000557623 CTTNBP2NLQ9P2B4 639 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 DNAI1Q9UI46 699 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 VPS51Q9UID3 782 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 MYO15AQ9UKN7 3530 aa12.79□□□□□ -0.36
SLIRP-211ENST00000557623 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 CBX4O00257 560 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 EEF2KO00418 725 aaKnown RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 SNAP91O60641 907 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 SRCP12931 536 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 FECHP22830 423 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 DHPSP49366 369 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms