RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 FAM237AA0A1B0GTK4 181 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 TCAF2A6NFQ2 919 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 F5H5T6 163 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 K7ENP7 123 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 MCF2LO15068 1137 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 SLC16A3O15427 465 aaKnown RBP18.86■□□□□ 0.61
ABCD4-228ENST00000557588 SLC28A2O43868 658 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 BRD2P25440 801 aaKnown RBP18.86■□□□□ 0.61
ABCD4-228ENST00000557588 NUMBP49757 651 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 DUSP3P51452 185 aaPredicted RBP18.86■□□□□ 0.61
ABCD4-228ENST00000557588 OXCT1P55809 520 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 ZNF284Q2VY69 593 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 INO80CQ6PI98 192 aaPredicted RBP18.86■□□□□ 0.61
ABCD4-228ENST00000557588 Q6ZVU0 165 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 SLC22A18ASQ8N1D0 253 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 OR13H1Q8NG92 308 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 FAM149B1Q96BN6 582 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 GRAMD1AQ96CP6 724 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 PRMT1Q99873 361 aaKnown RBP18.86■□□□□ 0.61
ABCD4-228ENST00000557588 MYOCQ99972 504 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 DUSP23Q9BVJ7 150 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 SATB2Q9UPW6 733 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 TDRD6O60522 2096 aaKnown RBP18.86■□□□□ 0.61
ABCD4-228ENST00000557588 BOD1L1Q8NFC6 3051 aa18.86■□□□□ 0.61
ABCD4-228ENST00000557588 A0A1W2PNU3 283 aaPredicted RBP18.85■□□□□ 0.61
ABCD4-228ENST00000557588 A0A1W2PQU0 124 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 SCAMP1O15126 338 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 AKT2P31751 481 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 SYKP43405 635 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 NUCB2P80303 420 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 LRMPQ12912 555 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 ZC3H12AQ5D1E8 599 aaKnown RBP18.85■□□□□ 0.61
ABCD4-228ENST00000557588 SYPL2Q5VXT5 272 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 ABI3BPQ7Z7G0 1075 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 CIR1Q86X95 450 aaPredicted RBP18.85■□□□□ 0.61
ABCD4-228ENST00000557588 MAPK15Q8TD08 544 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 ALG14Q96F25 216 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 CALN1Q9BXU9 219 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 CAAP1Q9H8G2 361 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 GPR27Q9NS67 375 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 SLC25A13Q9UJS0 675 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 PCDHGA8Q9Y5G5 932 aa18.85■□□□□ 0.61
ABCD4-228ENST00000557588 NEMP2A6NFY4 417 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 K7ESM1 405 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 RNF225M0QZC1 329 aaPredicted RBP18.84■□□□□ 0.61
ABCD4-228ENST00000557588 SLC31A1O15431 190 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 MYF5P13349 255 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 HNRNPA2B1P22626 353 aaKnown RBP18.84■□□□□ 0.61
ABCD4-228ENST00000557588 EIF4EBP2Q13542 120 aaPredicted RBP18.84■□□□□ 0.61
ABCD4-228ENST00000557588 C3orf38Q5JPI3 329 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 GCNT7Q6ZNI0 430 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 HORMAD1Q86X24 394 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 IFI44Q8TCB0 444 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 SLC35C1Q96A29 364 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 CCDC97Q96F63 343 aaPredicted RBP18.84■□□□□ 0.61
ABCD4-228ENST00000557588 SLC46A1Q96NT5 459 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.84■□□□□ 0.61
ABCD4-228ENST00000557588 ABCG4Q9H172 646 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 FZD3Q9NPG1 666 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 PCDHB4Q9Y5E5 795 aa18.84■□□□□ 0.61
ABCD4-228ENST00000557588 BSNQ9UPA5 3926 aa18.83■□□□□ 0.61
ABCD4-228ENST00000557588 KCNU1A8MYU2 1149 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.6
ABCD4-228ENST00000557588 TRUB2O95900 331 aaKnown RBP18.83■□□□□ 0.6
ABCD4-228ENST00000557588 RBMS1P29558 406 aaKnown RBP18.83■□□□□ 0.6
ABCD4-228ENST00000557588 NDUFA8P51970 172 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 DLG2Q15700 870 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 ACCSLQ4AC99 568 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 RABGAP1LQ5R372 815 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 KIAA1614Q5VZ46 1190 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 ZCCHC8Q6NZY4 707 aaKnown RBP18.83■□□□□ 0.6
ABCD4-228ENST00000557588 SMYD4Q8IYR2 804 aaPredicted RBP18.83■□□□□ 0.6
ABCD4-228ENST00000557588 SH2D3CQ8N5H7 860 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 ATP6V0D2Q8N8Y2 350 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 FAM174AQ8TBP5 190 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 PRR11Q96HE9 360 aaPredicted RBP18.83■□□□□ 0.6
ABCD4-228ENST00000557588 NOX5Q96PH1 765 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 PPP1R9BQ96SB3 815 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 OR51B4Q9Y5P0 310 aa18.83■□□□□ 0.6
ABCD4-228ENST00000557588 A6NNZ2 444 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 CDRT15L2A8MXV6 281 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 CTSLP07711 333 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 ZNF18P17022 549 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 TGM2P21980 687 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 GPD2P43304 727 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 HNRNPKP61978 463 aaKnown RBP eCLIP18.82■□□□□ 0.61e-7■■■■□ 26.3
ABCD4-228ENST00000557588 KRBA2Q6ZNG9 492 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 ZNF548Q8NEK5 533 aaPredicted RBP18.82■□□□□ 0.6
ABCD4-228ENST00000557588 OR52K2Q8NGK3 314 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 KLK6Q92876 244 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 ATXN7L3BQ96GX2 97 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 FEM1AQ9BSK4 669 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 OSBPL2Q9H1P3 480 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 POPDC2Q9HBU9 364 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.82■□□□□ 0.6
ABCD4-228ENST00000557588 NCKIPSDQ9NZQ3 722 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 HS3ST2Q9Y278 367 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 ENTPD2Q9Y5L3 495 aa18.82■□□□□ 0.6
ABCD4-228ENST00000557588 NEBLO76041 1014 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms