RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ERVW-1Q9UQF0 538 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 MAP4K5Q9Y4K4 846 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 PCDHA5Q9Y5H7 936 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 PCSK5Q92824 1860 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 TACC2O95359 2948 aa9.71□□□□□ -0.85
NEDD1-211ENST00000557454 SPTY2D1-AS1A0A0U1RR47 76 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 GCATO75600 419 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 LDHAP00338 332 aaKnown RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 PDGFAP04085 211 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 KRT18P05783 430 aaKnown RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 FAM200BP0CF97 657 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 ADORA2BP29275 332 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 UGT1A3P35503 534 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TAS2R38P59533 333 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 DUOXA2Q1HG44 320 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 PRR30Q53SZ7 412 aaPredicted RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TPRG1LQ5T0D9 272 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TMEM164Q5U3C3 297 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 ESRP1Q6NXG1 681 aaKnown RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CLEC20AQ6ZU45 233 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TRAPPC11Q7Z392 1133 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 ACOT1Q86TX2 421 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 MFN1Q8IWA4 741 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TP53INP2Q8IXH6 220 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CCDC13Q8IYE1 715 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CACNA2D3Q8IZS8 1091 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 KDM1BQ8NB78 822 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 KYQ8NBH2 561 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TTC13Q8NBP0 860 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TMEM159Q96B96 161 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 PLD4Q96BZ4 506 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TNIP3Q96KP6 325 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 LURAP1Q96LR2 239 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 C5orf34Q96MH7 638 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CDK5RAP1Q96SZ6 601 aaKnown RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CDH19Q9H159 772 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 TCEAL2Q9H3H9 227 aaPredicted RBP9.71□□□□□ -0.86
NEDD1-211ENST00000557454 LRRN3Q9H3W5 708 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 ST6GALNAC4Q9H4F1 302 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 PCIF1Q9H4Z3 704 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 PDRG1Q9NUG6 133 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 FAM49BQ9NUQ9 324 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 CLIC5Q9NZA1 410 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 GULP1Q9UBP9 304 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 ITIH6Q6UXX5 1313 aa9.71□□□□□ -0.86
NEDD1-211ENST00000557454 POM121BA6NF01 834 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 MKRN2OSH3BPM6 223 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 JAK2O60674 1132 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 TBL1XO60907 577 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 CCL4P13236 92 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 STK19P49842 368 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 ADKP55263 362 aaKnown RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF445P59923 1031 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 C16orf72Q14CZ0 275 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 TESK1Q15569 626 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 TRIP4Q15650 581 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 KMT5BQ4FZB7 885 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 PRRT3Q5FWE3 981 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 RFWD3Q6PCD5 774 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 KYAT3Q6YP21 454 aaKnown RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 SCARA5Q6ZMJ2 495 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 CCDC186Q7Z3E2 898 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 HORMAD1Q86X24 394 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 DCP2Q8IU60 420 aaKnown RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 RPL10LQ96L21 214 aaKnown RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 BMFQ96LC9 184 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
NEDD1-211ENST00000557454 B3GNT4Q9C0J1 378 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 SIRPGQ9P1W8 387 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 SPASTQ9UBP0 616 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 KCND3Q9UK17 655 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 SLC5A6Q9Y289 635 aa9.7□□□□□ -0.86
NEDD1-211ENST00000557454 LMO7DNF2Z398 122 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 GPR37O15354 613 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SPINT1O43278 529 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 RAD1O60671 282 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 ANXA6P08133 673 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 CELA2BP08218 269 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SRPRAP08240 638 aaKnown RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 GARTP22102 1010 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 KIF11P52732 1056 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 EIF2B5Q13144 721 aaKnown RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 PDE1CQ14123 709 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 DCAF6Q58WW2 860 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 PITRM1Q5JRX3 1037 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 PHF19Q5T6S3 580 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SEL1L3Q68CR1 1132 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 C16orf46Q6P387 395 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 DTHD1Q6ZMT9 781 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF720Q7Z2F6 126 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SFR1Q86XK3 245 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms