RNA–Protein interactions for RNA: ENST00000557441.5

CCNK-209, Transcript of cyclin K, human

TSL 5

Gene CCNK, Length 936 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNK-209	ENST00000557441	CDK11B	P21127	795 aa	Known RBP	13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	CD38	P28907	300 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	OR1E1	P30953	314 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	GRK6	P43250	576 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	RECQL	P46063	649 aa	Predicted RBP	13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	ADPRH	P54922	357 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	POLR2F	P61218	127 aa	Known RBP	13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	CCDC15	Q0P6D6	951 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	PRAMEF14	Q5SWL7	426 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	C6orf118	Q5T5N4	469 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	DPY19L2P1	Q6NXN4	242 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441		Q6ZVU0	165 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	TFAP2D	Q7Z6R9	452 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	PHLDB2	Q86SQ0	1253 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	ZNF677	Q86XU0	584 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	KDF1	Q8NAX2	398 aa	Predicted RBP	13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	OR52K2	Q8NGK3	314 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	FRS2	Q8WU20	508 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	ADAMTS14	Q8WXS8	1223 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	ALG14	Q96F25	216 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	C1orf74	Q96LT6	269 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	NLRC4	Q9NPP4	1024 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	DYRK4	Q9NR20	520 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	FANCL	Q9NW38	375 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	MPP6	Q9NZW5	540 aa		13.37	□□□□□ -0.27
CCNK-209	ENST00000557441	MAP1B	P46821	2468 aa	Known RBP	13.36	□□□□□ -0.27
CCNK-209	ENST00000557441		E9PAM4	449 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	MCF2L	O15068	1137 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	ITGAV	P06756	1048 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	ATXN1L	P0C7T5	689 aa	Known RBP	13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	MAT2A	P31153	395 aa	Known RBP	13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	STAT1	P42224	750 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	CTSK	P43235	329 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	KLK7	P49862	253 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	ATP11A	P98196	1134 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	KRT31	Q15323	416 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	SYCP1	Q15431	976 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	ARL13B	Q3SXY8	428 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	C5orf22	Q49AR2	442 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	ALF	Q53S48	1182 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	KCNT1	Q5JUK3	1230 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	GLRX5	Q86SX6	157 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	SETD3	Q86TU7	594 aa	Predicted RBP	13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	SLCO6A1	Q86UG4	719 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	FAM131B	Q86XD5	332 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	SH2D3C	Q8N5H7	860 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	PIP4K2C	Q8TBX8	421 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	EPS8L1	Q8TE68	723 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	GATA6	Q92908	595 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	NT5C3B	Q969T7	300 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	PGAP3	Q96FM1	320 aa	Predicted RBP	13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	CFAP57	Q96MR6	1250 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	GDF3	Q9NR23	364 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	PPM1H	Q9ULR3	514 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	OR51B4	Q9Y5P0	310 aa		13.36	□□□□□ -0.27
CCNK-209	ENST00000557441	PCNX2	A6NKB5	2137 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	DRGX	A6NNA5	263 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	CBX4	O00257	560 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	KPNA3	O00505	521 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ALOX15B	O15296	676 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SLC7A4	O43246	635 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	TNFSF14	O43557	240 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	PCDHGA12	O60330	932 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SNAP91	O60641	907 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ENDOD1	O94919	500 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	MT-CO1	P00395	513 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SDC4	P31431	198 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	DRD3	P35462	400 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SOX5	P35711	763 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	FLT3	P36888	993 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ARRB1	P49407	418 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	DNA2	P51530	1060 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	NOMO3	P69849	1222 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	CDR2	Q01850	454 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	CNTN1	Q12860	1018 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	STAT4	Q14765	748 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	CDO1	Q16878	200 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	OTUD1	Q5VV17	481 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	RETSAT	Q6NUM9	610 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	LINGO4	Q6UY18	593 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	DBX2	Q6ZNG2	339 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	EMC1	Q8N766	993 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	NEK11	Q8NG66	645 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SLC30A5	Q8TAD4	765 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SLC20A1	Q8WUM9	679 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	HAPLN3	Q96S86	360 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ELF4	Q99607	663 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ORAI3	Q9BRQ5	295 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ZYG11B	Q9C0D3	744 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	KDM4C	Q9H3R0	1056 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	EBF2	Q9HAK2	575 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ANLN	Q9NQW6	1124 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	METTL5	Q9NRN9	209 aa	Known RBP	13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	TMPRSS4	Q9NRS4	437 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	SEPT11	Q9NVA2	429 aa	Known RBP	13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	ANO10	Q9NW15	660 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	FTSJ1	Q9UET6	329 aa		13.35	□□□□□ -0.27
CCNK-209	ENST00000557441	VPS51	Q9UID3	782 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms