RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 JUNDP17535 347 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 NR1D1P20393 614 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 HNRNPA2B1P22626 353 aaKnown RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 NEK4P51957 841 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 KLRB1Q12918 225 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 C1orf61Q13536 156 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 LACTB2Q53H82 288 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 MPP7Q5T2T1 576 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 C1QL3Q5VWW1 255 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 ABI3BPQ7Z7G0 1075 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 UNC93AQ86WB7 457 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 HORMAD1Q86X24 394 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 APCDD1Q8J025 514 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 RBFAQ8N0V3 343 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 SDR16C5Q8N3Y7 309 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 EDEM1Q92611 657 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 SPAG5Q96R06 1193 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 DUSP16Q9BY84 665 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 GULP1Q9UBP9 304 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 HBS1LQ9Y450 684 aaKnown RBP12.9□□□□□ -0.34
PSEN1-220ENST00000557037 DAAM1Q9Y4D1 1078 aa12.9□□□□□ -0.34
PSEN1-220ENST00000557037 POM121BA6NF01 834 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 A6NNZ2 444 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 CLIC2O15247 247 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 GCATO75600 419 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 LIFP15018 202 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 NOS2P35228 1153 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 HOXD13P35453 343 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 CDH18Q13634 790 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 FAM133BQ5BKY9 247 aaKnown RBP12.89□□□□□ -0.35
PSEN1-220ENST00000557037 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 FAM46CQ5VWP2 391 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 PARGQ86W56 976 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 HEATR4Q86WZ0 1026 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 ZNF557Q8N988 423 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-220ENST00000557037 HJURPQ8NCD3 748 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-220ENST00000557037 OR8D1Q8WZ84 308 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 CCDC74AQ96AQ1 378 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 BMFQ96LC9 184 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 PRICKLE1Q96MT3 831 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-220ENST00000557037 LLPHQ9BRT6 129 aaKnown RBP12.89□□□□□ -0.35
PSEN1-220ENST00000557037 TCEAL2Q9H3H9 227 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-220ENST00000557037 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
PSEN1-220ENST00000557037 TRPM6Q9BX84 2022 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 A0A1W2PQM1 296 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 WIPF3A6NGB9 483 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 TPP1O14773 563 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 NKX2-8O15522 239 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 MOCS3O95396 460 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 VNN1O95497 513 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 LATS1O95835 1130 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 PRKAR1AP10644 381 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 P4HA1P13674 534 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 CCKBRP32239 447 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 KRTAP21-3Q3LHN1 58 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 PPP1R26Q5T8A7 1209 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 SPOPLQ6IQ16 392 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 FAM114A1Q8IWE2 563 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 CFAP52Q8N1V2 620 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 RNF139Q8WU17 664 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 EPSTI1Q96J88 318 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 TMEM74Q96NL1 305 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 CPEB1Q9BZB8 566 aaKnown RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 CASS4Q9NQ75 786 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 SIRPGQ9P1W8 387 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
PSEN1-220ENST00000557037 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
PSEN1-220ENST00000557037 C1QTNF3-AMACRE9PGA6 284 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 SPINT1O43278 529 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 BNIP3LO60238 219 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 PCDH8O95206 1070 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ANXA6P08133 673 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ZNF18P17022 549 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
PSEN1-220ENST00000557037 CD82P27701 267 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ASPAP45381 313 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 TKTL1P51854 596 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
PSEN1-220ENST00000557037 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 NADSYN1Q6IA69 706 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 SV2AQ7L0J3 742 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
PSEN1-220ENST00000557037 ZC3H18Q86VM9 953 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms