RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 RPS14P62263 151 aaKnown RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 SFSWAPQ12872 951 aaKnown RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 POLD3Q15054 466 aaPredicted RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 DLG2Q15700 870 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 HADHQ16836 314 aaKnown RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 PMS2CLQ68D20 193 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 CYP4V2Q6ZWL3 525 aaPredicted RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 FRMD1Q8N878 549 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 ATP11CQ8NB49 1132 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 OR7D4Q8NG98 312 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 SLC35G2Q8TBE7 412 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 TEKT4Q8WW24 435 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 ARHGEF2Q92974 986 aaKnown RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 PEBP4Q96S96 227 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 FAM129BQ96TA1 746 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 MTG2Q9H4K7 406 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 ATP13A1Q9HD20 1204 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 IMPACTQ9P2X3 320 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 MBD1Q9UIS9 605 aaPredicted RBP10.94□□□□□ -0.66
LINC00239-201ENST00000556973 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 PCDHGA5Q9Y5G8 931 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 TNRC6BQ9UPQ9 1833 aaKnown RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 RALGAPA1Q6GYQ0 2036 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 EEF2KO00418 725 aaKnown RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 DAPK3O43293 454 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 KDELR3O43731 214 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 SNAP91O60641 907 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 NDUFS2O75306 463 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ZMPSTE24O75844 475 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 PROSCO94903 275 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 EPN2O95208 641 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 MT-CO1P00395 513 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 RARAP10276 462 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 SRCP12931 536 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 BCKDHBP21953 392 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 CD6P30203 668 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 CDC25BP30305 580 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 CYLC1P35663 651 aaPredicted RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ACVRL1P37023 503 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ARHGAP25P42331 645 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 MAGEA1P43355 309 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 GEMIN4P57678 1058 aaKnown RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 TPI1P60174 286 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 RPL6Q02878 288 aaKnown RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 TCEAL1Q15170 157 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 CA9Q16790 459 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 PPP6R3Q5H9R7 873 aaPredicted RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 KCNT1Q5JUK3 1230 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 DAB2IPQ5VWQ8 1189 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ZNF776Q68DI1 518 aaPredicted RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 TMEFF1Q8IYR6 380 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 UMODL1-AS1Q8N2C9 162 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 DCLK2Q8N568 766 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ZNF419Q96HQ0 510 aaPredicted RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 CCDC114Q96M63 670 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ZWILCHQ9H900 591 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 GPATCH2LQ9NWQ4 482 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 WSB2Q9NYS7 404 aaPredicted RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 NCKAP1Q9Y2A7 1128 aa10.93□□□□□ -0.66
LINC00239-201ENST00000556973 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
LINC00239-201ENST00000556973 ZSCAN5CA6NGD5 496 aaPredicted RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 MCF2LO15068 1137 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 ALOX15BO15296 676 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 FOXD2O60548 495 aaPredicted RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 MTA2O94776 668 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 ADH1BP00325 375 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 GOT1P17174 413 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 C5AR1P21730 350 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 FECHP22830 423 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 GLDCP23378 1020 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 IL1R2P27930 398 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 SLC8A1P32418 973 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 ARL4AP40617 200 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 DPP6P42658 865 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 SSR1P43307 286 aaKnown RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 SERPINH1P50454 418 aaKnown RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 NDST2P52849 883 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 ARF5P84085 180 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 SLC25A11Q02978 314 aaKnown RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 SPEM2Q0P670 501 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 ELAVL3Q14576 367 aaKnown RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 SPA17Q15506 151 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 CST6Q15828 149 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 DPYSL2Q16555 572 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 PARP15Q460N3 678 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 TTC31Q49AM3 519 aaPredicted RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 LINGO4Q6UY18 593 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 RFX8Q6ZV50 586 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 USP30Q70CQ3 517 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 DSG4Q86SJ6 1040 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 MMAAQ8IVH4 418 aaKnown RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 STK40Q8N2I9 435 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 CADM4Q8NFZ8 388 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 HSPH1Q92598 858 aa10.92□□□□□ -0.66
LINC00239-201ENST00000556973 TOE1Q96GM8 510 aaKnown RBP10.92□□□□□ -0.66
LINC00239-201ENST00000556973 KCTD15Q96SI1 283 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms